Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3836

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,004,828	+		Psest_3834	0.80	-1.0
4,004,941	+		Psest_3834	0.90	+1.5
4,005,019	+				+0.0
4,005,048	+				-0.7
4,005,048	+				-0.3
4,005,049	-				-0.3
4,005,049	-				+1.8
4,005,049	-				+0.1
4,005,049	-				+0.8
4,005,049	-				+0.7
4,005,227	+		Psest_3835	0.77	+1.6
4,005,227	+		Psest_3835	0.77	+0.1
4,005,227	+		Psest_3835	0.77	+0.2
4,005,227	+		Psest_3835	0.77	-1.5
4,005,227	+		Psest_3835	0.77	-0.2
4,005,227	+		Psest_3835	0.77	+0.6
4,005,227	+		Psest_3835	0.77	+0.1
4,005,227	+		Psest_3835	0.77	-1.2
4,005,228	-		Psest_3835	0.78	-1.9
4,005,228	-		Psest_3835	0.78	+1.7
4,005,228	-		Psest_3835	0.78	+1.5
4,005,228	-		Psest_3835	0.78	+0.6
4,005,228	-		Psest_3835	0.78	+1.9
4,005,228	-		Psest_3835	0.78	-0.5
4,005,228	-		Psest_3835	0.78	+0.9
4,005,228	-		Psest_3835	0.78	+0.6
4,005,228	-		Psest_3835	0.78	-0.4
4,005,228	-		Psest_3835	0.78	-0.2
4,005,228	-		Psest_3835	0.78	+1.5
4,005,228	-		Psest_3835	0.78	+0.7
4,005,228	-		Psest_3835	0.78	-0.2
4,005,228	-		Psest_3835	0.78	+0.2
4,005,231	+		Psest_3835	0.80	+0.6
4,005,231	+		Psest_3835	0.80	-0.9
4,005,231	+		Psest_3835	0.80	-0.3
4,005,231	+		Psest_3835	0.80	-0.5
4,005,232	-		Psest_3835	0.80	+1.2
4,005,232	-		Psest_3835	0.80	-0.6
4,005,232	-		Psest_3835	0.80	+0.2
4,005,232	-		Psest_3835	0.80	+1.5
4,005,233	+		Psest_3835	0.81	-0.5
4,005,233	+		Psest_3835	0.81	-1.6
4,005,234	-		Psest_3835	0.82	+0.8
4,005,234	-		Psest_3835	0.82	+1.2
4,005,234	-		Psest_3835	0.82	+0.1
4,005,302	-				+0.1
4,005,302	-				+1.2
4,005,302	-				+0.5
4,005,303	+				+1.9
4,005,304	-				-1.3
4,005,380	+				-1.7
4,005,422	+				-0.0
4,005,422	+				+0.1
4,005,423	-				-0.2
4,005,423	-				-0.1
4,005,461	+				-0.7
4,005,462	-				-1.1
4,005,462	-				+0.1
4,005,462	-				-2.0
4,005,462	-				-0.7
4,005,464	+				+2.1
4,005,464	+				+0.8
4,005,464	+				-0.4
4,005,465	-				-1.3
4,005,465	-				-1.3
4,005,465	-				+1.3
4,005,465	-				+1.5
4,005,465	-				-2.7
4,005,465	-				-1.2
4,005,465	-				+0.0
4,005,465	-				+0.2
4,005,521	-				-0.9
4,005,521	-				+1.1
4,005,541	+				-0.0
4,005,541	+				+0.5
4,006,103	+		Psest_3836	0.42	-1.7
4,006,103	+		Psest_3836	0.42	-2.6
4,006,103	+		Psest_3836	0.42	-0.2
4,006,104	-		Psest_3836	0.43	-0.6
4,006,104	-		Psest_3836	0.43	-0.4
4,006,104	-		Psest_3836	0.43	-0.0
4,006,147	+		Psest_3836	0.45	-1.6
4,006,148	-		Psest_3836	0.45	-0.5
4,006,335	-		Psest_3836	0.56	-0.6
4,006,521	+		Psest_3836	0.67	-2.6
4,006,994	+				+1.4
4,006,995	-				-0.6
4,006,995	-				+0.5
4,006,995	-				+0.7
4,007,068	+				-0.2
4,007,068	+				-0.6
4,007,068	+				-0.4
4,007,068	+				-0.6
4,007,069	-				-0.2
4,007,069	-				+0.2
4,007,120	+				+1.4
4,007,120	+				-3.2
4,007,120	+				+2.3
4,007,121	-				+0.1
4,007,121	-				+0.2
4,007,121	-				+0.9
4,007,121	-				+1.5
4,007,121	-				+0.2
4,007,121	-				-1.0
4,007,121	-				+2.3
4,007,121	-				+0.8
4,007,121	-				+0.1
4,007,121	-				+2.8
4,007,121	-				-0.3
4,007,121	-				-0.8
4,007,121	-				-0.3
4,007,319	+				-0.3
4,007,320	-				-1.3
4,007,424	+				+0.5
4,007,424	+				+1.7
4,007,424	+				-1.7
4,007,425	-				-1.9
4,007,425	-				+0.1
4,007,566	+		Psest_3837	0.12	-2.3
4,007,566	+		Psest_3837	0.12	-0.1
4,007,567	-		Psest_3837	0.12	+1.8
4,007,567	-		Psest_3837	0.12	-0.1
4,007,567	-		Psest_3837	0.12	+0.1
4,007,567	-		Psest_3837	0.12	-1.4
4,007,658	+		Psest_3837	0.16	+1.1
4,007,659	-		Psest_3837	0.16	+1.8