Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2606 and Psest_2607 overlap by 107 nucleotides Psest_2607 and Psest_2608 are separated by 28 nucleotides
Psest_2606: Psest_2606 - Glycosyltransferase, at 2,788,335 to 2,789,645
_2606
Psest_2607: Psest_2607 - hypothetical protein, at 2,789,539 to 2,790,837
_2607
Psest_2608: Psest_2608 - hypothetical protein, at 2,790,866 to 2,792,179
_2608
Position (kb)
2789
2790
2791 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2788.539 kb on + strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.540 kb on - strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.621 kb on + strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.622 kb on - strand, within Psest_2606 at 2788.632 kb on - strand, within Psest_2606 at 2788.721 kb on - strand, within Psest_2606 at 2788.735 kb on + strand, within Psest_2606 at 2788.735 kb on + strand, within Psest_2606 at 2788.749 kb on + strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2788.915 kb on - strand, within Psest_2606 at 2789.019 kb on + strand, within Psest_2606 at 2789.020 kb on - strand, within Psest_2606 at 2789.127 kb on + strand, within Psest_2606 at 2789.127 kb on + strand, within Psest_2606 at 2789.128 kb on - strand, within Psest_2606 at 2789.128 kb on - strand, within Psest_2606 at 2789.343 kb on - strand, within Psest_2606 at 2789.343 kb on - strand, within Psest_2606 at 2789.404 kb on - strand, within Psest_2606 at 2789.404 kb on - strand, within Psest_2606 at 2789.669 kb on - strand, within Psest_2607 at 2789.671 kb on + strand, within Psest_2607 at 2789.671 kb on + strand, within Psest_2607 at 2789.672 kb on - strand, within Psest_2607 at 2789.672 kb on - strand, within Psest_2607 at 2789.672 kb on - strand, within Psest_2607 at 2789.672 kb on - strand, within Psest_2607 at 2789.705 kb on - strand, within Psest_2607 at 2789.705 kb on - strand, within Psest_2607 at 2789.783 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.866 kb on + strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2789.867 kb on - strand, within Psest_2607 at 2790.010 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.016 kb on + strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.017 kb on - strand, within Psest_2607 at 2790.130 kb on + strand, within Psest_2607 at 2790.130 kb on + strand, within Psest_2607 at 2790.131 kb on - strand, within Psest_2607 at 2790.131 kb on - strand, within Psest_2607 at 2790.131 kb on - strand, within Psest_2607 at 2790.184 kb on + strand, within Psest_2607 at 2790.184 kb on + strand, within Psest_2607 at 2790.185 kb on - strand, within Psest_2607 at 2790.185 kb on - strand, within Psest_2607 at 2790.241 kb on + strand, within Psest_2607 at 2790.241 kb on + strand, within Psest_2607 at 2790.241 kb on + strand, within Psest_2607 at 2790.241 kb on + strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.242 kb on - strand, within Psest_2607 at 2790.315 kb on - strand, within Psest_2607 at 2790.315 kb on - strand, within Psest_2607 at 2790.351 kb on - strand, within Psest_2607 at 2790.562 kb on + strand, within Psest_2607 at 2790.562 kb on + strand, within Psest_2607 at 2790.563 kb on - strand, within Psest_2607 at 2790.593 kb on + strand, within Psest_2607 at 2790.593 kb on + strand, within Psest_2607 at 2790.594 kb on - strand, within Psest_2607 at 2790.594 kb on - strand, within Psest_2607 at 2790.601 kb on + strand, within Psest_2607 at 2790.601 kb on + strand, within Psest_2607 at 2790.601 kb on + strand, within Psest_2607 at 2790.602 kb on - strand, within Psest_2607 at 2790.863 kb on + strand at 2790.863 kb on + strand at 2790.863 kb on + strand at 2790.863 kb on + strand at 2790.863 kb on + strand at 2790.864 kb on - strand at 2790.864 kb on - strand at 2790.864 kb on - strand at 2790.864 kb on - strand at 2790.864 kb on - strand at 2791.073 kb on + strand, within Psest_2608 at 2791.074 kb on - strand, within Psest_2608 at 2791.074 kb on - strand, within Psest_2608 at 2791.245 kb on - strand, within Psest_2608 at 2791.290 kb on - strand, within Psest_2608 at 2791.290 kb on - strand, within Psest_2608 at 2791.290 kb on - strand, within Psest_2608 at 2791.290 kb on - strand, within Psest_2608 at 2791.514 kb on + strand, within Psest_2608 at 2791.514 kb on + strand, within Psest_2608 at 2791.514 kb on + strand, within Psest_2608 at 2791.515 kb on - strand, within Psest_2608 at 2791.515 kb on - strand, within Psest_2608 at 2791.515 kb on - strand, within Psest_2608 at 2791.623 kb on - strand, within Psest_2608 at 2791.623 kb on - strand, within Psest_2608 at 2791.692 kb on - strand, within Psest_2608 at 2791.692 kb on - strand, within Psest_2608 at 2791.707 kb on - strand, within Psest_2608 at 2791.707 kb on - strand, within Psest_2608 at 2791.707 kb on - strand, within Psest_2608 at 2791.707 kb on - strand, within Psest_2608 at 2791.751 kb on + strand, within Psest_2608
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,788,539 + Psest_2606 0.16 -0.9 2,788,540 - Psest_2606 0.16 +1.3 2,788,540 - Psest_2606 0.16 +0.3 2,788,540 - Psest_2606 0.16 -1.2 2,788,621 + Psest_2606 0.22 +0.9 2,788,621 + Psest_2606 0.22 -0.3 2,788,621 + Psest_2606 0.22 +0.9 2,788,622 - Psest_2606 0.22 -0.5 2,788,622 - Psest_2606 0.22 +0.1 2,788,622 - Psest_2606 0.22 -0.1 2,788,622 - Psest_2606 0.22 -0.7 2,788,622 - Psest_2606 0.22 +0.1 2,788,622 - Psest_2606 0.22 +0.6 2,788,632 - Psest_2606 0.23 -0.2 2,788,721 - Psest_2606 0.29 +1.2 2,788,735 + Psest_2606 0.31 +0.5 2,788,735 + Psest_2606 0.31 +0.8 2,788,749 + Psest_2606 0.32 +0.9 2,788,915 - Psest_2606 0.44 +1.7 2,788,915 - Psest_2606 0.44 -1.1 2,788,915 - Psest_2606 0.44 +0.1 2,789,019 + Psest_2606 0.52 -0.0 2,789,020 - Psest_2606 0.52 +0.8 2,789,127 + Psest_2606 0.60 -0.6 2,789,127 + Psest_2606 0.60 -1.4 2,789,128 - Psest_2606 0.60 -1.0 2,789,128 - Psest_2606 0.60 -0.6 2,789,343 - Psest_2606 0.77 +0.7 2,789,343 - Psest_2606 0.77 +0.7 2,789,404 - Psest_2606 0.82 +0.6 2,789,404 - Psest_2606 0.82 -1.2 2,789,669 - Psest_2607 0.10 +1.0 2,789,671 + Psest_2607 0.10 -0.9 2,789,671 + Psest_2607 0.10 -1.0 2,789,672 - Psest_2607 0.10 -0.3 2,789,672 - Psest_2607 0.10 -2.2 2,789,672 - Psest_2607 0.10 +0.3 2,789,672 - Psest_2607 0.10 -0.3 2,789,705 - Psest_2607 0.13 -0.3 2,789,705 - Psest_2607 0.13 -0.8 2,789,783 + Psest_2607 0.19 -0.2 2,789,866 + Psest_2607 0.25 +0.5 2,789,866 + Psest_2607 0.25 -1.5 2,789,866 + Psest_2607 0.25 -0.9 2,789,866 + Psest_2607 0.25 +0.0 2,789,866 + Psest_2607 0.25 -0.5 2,789,866 + Psest_2607 0.25 -1.7 2,789,866 + Psest_2607 0.25 +1.0 2,789,866 + Psest_2607 0.25 -0.4 2,789,866 + Psest_2607 0.25 -2.5 2,789,867 - Psest_2607 0.25 -0.6 2,789,867 - Psest_2607 0.25 -0.2 2,789,867 - Psest_2607 0.25 -0.8 2,789,867 - Psest_2607 0.25 +0.6 2,789,867 - Psest_2607 0.25 +0.7 2,789,867 - Psest_2607 0.25 -1.5 2,789,867 - Psest_2607 0.25 -2.1 2,789,867 - Psest_2607 0.25 +0.5 2,789,867 - Psest_2607 0.25 +0.0 2,789,867 - Psest_2607 0.25 -0.0 2,789,867 - Psest_2607 0.25 -0.1 2,789,867 - Psest_2607 0.25 -0.5 2,789,867 - Psest_2607 0.25 +1.0 2,789,867 - Psest_2607 0.25 -0.9 2,789,867 - Psest_2607 0.25 -0.2 2,789,867 - Psest_2607 0.25 +0.1 2,789,867 - Psest_2607 0.25 +0.1 2,789,867 - Psest_2607 0.25 -2.1 2,789,867 - Psest_2607 0.25 +0.7 2,790,010 + Psest_2607 0.36 -0.5 2,790,016 + Psest_2607 0.37 -0.2 2,790,016 + Psest_2607 0.37 -0.7 2,790,016 + Psest_2607 0.37 -1.4 2,790,016 + Psest_2607 0.37 -1.7 2,790,016 + Psest_2607 0.37 -1.4 2,790,016 + Psest_2607 0.37 -0.7 2,790,017 - Psest_2607 0.37 -0.8 2,790,017 - Psest_2607 0.37 +1.7 2,790,017 - Psest_2607 0.37 -0.3 2,790,017 - Psest_2607 0.37 -1.0 2,790,017 - Psest_2607 0.37 +0.9 2,790,017 - Psest_2607 0.37 -1.2 2,790,017 - Psest_2607 0.37 +0.8 2,790,017 - Psest_2607 0.37 -0.4 2,790,130 + Psest_2607 0.45 -0.7 2,790,130 + Psest_2607 0.45 -0.3 2,790,131 - Psest_2607 0.46 +0.3 2,790,131 - Psest_2607 0.46 +0.4 2,790,131 - Psest_2607 0.46 -1.8 2,790,184 + Psest_2607 0.50 -0.7 2,790,184 + Psest_2607 0.50 +0.8 2,790,185 - Psest_2607 0.50 +0.3 2,790,185 - Psest_2607 0.50 -0.8 2,790,241 + Psest_2607 0.54 -0.1 2,790,241 + Psest_2607 0.54 -1.2 2,790,241 + Psest_2607 0.54 -0.3 2,790,241 + Psest_2607 0.54 +0.2 2,790,242 - Psest_2607 0.54 +0.7 2,790,242 - Psest_2607 0.54 +0.7 2,790,242 - Psest_2607 0.54 -0.6 2,790,242 - Psest_2607 0.54 +1.2 2,790,242 - Psest_2607 0.54 +0.3 2,790,242 - Psest_2607 0.54 -2.7 2,790,242 - Psest_2607 0.54 +0.3 2,790,315 - Psest_2607 0.60 +0.2 2,790,315 - Psest_2607 0.60 -0.9 2,790,351 - Psest_2607 0.63 +0.3 2,790,562 + Psest_2607 0.79 +0.5 2,790,562 + Psest_2607 0.79 -1.1 2,790,563 - Psest_2607 0.79 +1.7 2,790,593 + Psest_2607 0.81 +1.1 2,790,593 + Psest_2607 0.81 +0.1 2,790,594 - Psest_2607 0.81 -0.2 2,790,594 - Psest_2607 0.81 -1.7 2,790,601 + Psest_2607 0.82 -1.0 2,790,601 + Psest_2607 0.82 -0.3 2,790,601 + Psest_2607 0.82 -0.7 2,790,602 - Psest_2607 0.82 +0.0 2,790,863 + +0.2 2,790,863 + +1.3 2,790,863 + +0.1 2,790,863 + +0.3 2,790,863 + -1.7 2,790,864 - +1.3 2,790,864 - +1.1 2,790,864 - +0.7 2,790,864 - +0.3 2,790,864 - +0.1 2,791,073 + Psest_2608 0.16 -0.6 2,791,074 - Psest_2608 0.16 +0.9 2,791,074 - Psest_2608 0.16 -0.2 2,791,245 - Psest_2608 0.29 +0.1 2,791,290 - Psest_2608 0.32 +1.6 2,791,290 - Psest_2608 0.32 +0.5 2,791,290 - Psest_2608 0.32 +1.5 2,791,290 - Psest_2608 0.32 +0.4 2,791,514 + Psest_2608 0.49 -1.6 2,791,514 + Psest_2608 0.49 -0.0 2,791,514 + Psest_2608 0.49 -0.3 2,791,515 - Psest_2608 0.49 -1.5 2,791,515 - Psest_2608 0.49 +0.5 2,791,515 - Psest_2608 0.49 -0.4 2,791,623 - Psest_2608 0.58 +0.4 2,791,623 - Psest_2608 0.58 +1.8 2,791,692 - Psest_2608 0.63 -2.1 2,791,692 - Psest_2608 0.63 +0.5 2,791,707 - Psest_2608 0.64 -0.1 2,791,707 - Psest_2608 0.64 +0.4 2,791,707 - Psest_2608 0.64 -2.4 2,791,707 - Psest_2608 0.64 -1.1 2,791,751 + Psest_2608 0.67 -1.5
Or see this region's nucleotide sequence