Experiment: syringaldehyde 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0673 and Psest_0674 are separated by 107 nucleotides Psest_0674 and Psest_0675 are separated by 1 nucleotides Psest_0675 and Psest_0676 are separated by 100 nucleotides
Psest_0673: Psest_0673 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 734,849 to 736,198
_0673
Psest_0674: Psest_0674 - polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases, at 736,306 to 736,935
_0674
Psest_0675: Psest_0675 - Predicted periplasmic lipoprotein, at 736,937 to 737,227
_0675
Psest_0676: Psest_0676 - ATP-dependent metalloprotease FtsH, at 737,328 to 739,175
_0676
Position (kb) 736
737
738 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 736.067 kb on - strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.256 kb on + strand at 736.917 kb on + strand at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675 at 737.225 kb on + strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.276 kb on + strand at 737.276 kb on + strand at 737.358 kb on + strand at 737.398 kb on - strand at 737.398 kb on - strand at 737.398 kb on - strand at 737.437 kb on - strand at 737.437 kb on - strand at 737.502 kb on - strand at 737.502 kb on - strand at 737.502 kb on - strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.504 kb on - strand at 737.504 kb on - strand at 737.504 kb on - strand at 737.607 kb on + strand, within Psest_0676 at 737.766 kb on + strand, within Psest_0676 at 737.872 kb on - strand, within Psest_0676 at 737.872 kb on - strand, within Psest_0676
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 4 mM remove 736,067 - +3.0 736,236 + -0.5 736,236 + +0.2 736,236 + -0.0 736,256 + +2.6 736,917 + -0.4 737,039 + Psest_0675 0.35 -0.7 737,039 + Psest_0675 0.35 -1.2 737,039 + Psest_0675 0.35 -2.5 737,039 + Psest_0675 0.35 -0.9 737,040 - Psest_0675 0.35 -0.4 737,040 - Psest_0675 0.35 -1.8 737,121 - Psest_0675 0.63 +0.9 737,121 - Psest_0675 0.63 -0.8 737,225 + +0.8 737,226 - +0.2 737,226 - +0.2 737,226 - +1.5 737,226 - -0.5 737,276 + +0.5 737,276 + -1.7 737,358 + +2.6 737,398 - +0.7 737,398 - -0.3 737,398 - -1.4 737,437 - +0.2 737,437 - +1.8 737,502 - +0.3 737,502 - -2.3 737,502 - -0.5 737,503 + -0.8 737,503 + +0.5 737,503 + +0.5 737,503 + +0.7 737,503 + +0.7 737,503 + -1.3 737,503 + +0.4 737,503 + +2.3 737,503 + -0.4 737,503 + -1.1 737,504 - +2.0 737,504 - +1.4 737,504 - -1.4 737,607 + Psest_0676 0.15 +1.0 737,766 + Psest_0676 0.24 +2.0 737,872 - Psest_0676 0.29 -0.9 737,872 - Psest_0676 0.29 -0.4
Or see this region's nucleotide sequence