Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3209

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
3,376,710	+				-1.1
3,376,710	+				-1.9
3,376,710	+				-1.0
3,376,710	+				-1.4
3,376,710	+				-0.3
3,376,710	+				+0.1
3,376,710	+				+0.7
3,376,711	-				-0.8
3,376,711	-				+0.0
3,376,711	-				-2.2
3,376,711	-				-0.0
3,376,711	-				+1.9
3,376,711	-				-0.8
3,376,711	-				+1.6
3,376,711	-				+0.0
3,376,711	-				+0.9
3,376,711	-				+0.8
3,376,719	+				-0.9
3,376,720	-				-1.0
3,376,720	-				+0.0
3,376,766	-				-0.5
3,376,809	+				-0.4
3,376,810	-				-2.5
3,376,885	+		Psest_3208	0.14	+2.4
3,376,885	+		Psest_3208	0.14	+0.9
3,376,885	+		Psest_3208	0.14	+2.5
3,376,885	+		Psest_3208	0.14	+0.2
3,376,885	+		Psest_3208	0.14	+2.8
3,376,885	+		Psest_3208	0.14	+0.5
3,376,885	+		Psest_3208	0.14	-0.8
3,376,885	+		Psest_3208	0.14	-1.4
3,376,886	-		Psest_3208	0.14	+0.2
3,376,886	-		Psest_3208	0.14	-1.3
3,376,886	-		Psest_3208	0.14	+1.3
3,376,886	-		Psest_3208	0.14	-0.4
3,376,886	-		Psest_3208	0.14	+1.4
3,376,886	-		Psest_3208	0.14	+0.2
3,376,986	+		Psest_3208	0.27	+1.2
3,376,986	+		Psest_3208	0.27	+0.1
3,376,986	+		Psest_3208	0.27	+0.6
3,376,986	+		Psest_3208	0.27	+1.4
3,376,987	-		Psest_3208	0.28	-0.2
3,376,987	-		Psest_3208	0.28	-0.3
3,377,110	+		Psest_3208	0.44	+0.7
3,377,110	+		Psest_3208	0.44	-1.0
3,377,111	-		Psest_3208	0.44	-0.1
3,377,203	-		Psest_3208	0.56	-1.3
3,377,313	+		Psest_3208	0.71	+2.7
3,377,313	+		Psest_3208	0.71	-0.3
3,377,313	+		Psest_3208	0.71	-0.9
3,377,313	+		Psest_3208	0.71	+1.6
3,377,313	+		Psest_3208	0.71	+0.6
3,377,314	-		Psest_3208	0.71	+0.5
3,377,314	-		Psest_3208	0.71	+0.8
3,377,314	-		Psest_3208	0.71	-1.4
3,377,415	+		Psest_3208	0.84	+1.5
3,377,415	+		Psest_3208	0.84	-0.7
3,377,415	+		Psest_3208	0.84	-0.5
3,377,415	+		Psest_3208	0.84	+0.0
3,377,415	+		Psest_3208	0.84	+2.7
3,377,416	-		Psest_3208	0.84	-1.3
3,377,532	+				+0.5
3,377,532	+				-0.6
3,377,532	+				+1.2
3,377,532	+				-0.5
3,377,533	-				+0.6
3,377,613	+				-0.4
3,377,613	+				-0.8
3,377,613	+				+0.4
3,377,613	+				+4.3
3,377,613	+				+1.0
3,377,613	+				+1.8
3,377,613	+				-0.3
3,377,613	+				+0.3
3,377,613	+				-1.3
3,377,614	-				+2.4
3,377,614	-				+0.4
3,377,614	-				+1.0
3,377,614	-				+0.3
3,377,614	-				+0.4
3,377,614	-				+0.5
3,377,614	-				+1.8
3,377,614	-				+1.0
3,377,614	-				+2.4
3,377,614	-				+0.2
3,377,750	+				-0.0
3,377,750	+				+1.5
3,377,750	+				+1.0
3,377,750	+				+0.0
3,377,751	-				-1.1
3,377,751	-				+0.3
3,377,751	-				+0.8
3,377,751	-				-1.2
3,377,772	+				+0.2
3,377,773	-				+0.5
3,377,773	-				-0.8
3,377,773	-				+0.7
3,377,773	-				+1.7
3,377,773	-				-0.1
3,378,121	+		Psest_3209	0.37	-0.2
3,378,122	-		Psest_3209	0.37	+0.1
3,378,122	-		Psest_3209	0.37	-0.7
3,378,122	-		Psest_3209	0.37	-0.5
3,378,241	+		Psest_3209	0.48	-1.0
3,378,292	+		Psest_3209	0.53	+0.6
3,378,583	+		Psest_3209	0.79	-1.8
3,378,584	-		Psest_3209	0.79	-0.2
3,378,584	-		Psest_3209	0.79	+0.6
3,378,686	-		Psest_3209	0.88	-1.1
3,378,686	-		Psest_3209	0.88	-1.3
3,378,804	+				+1.3
3,378,804	+				-1.0
3,378,804	+				-1.0
3,378,805	-				-0.9
3,378,805	-				+3.2
3,378,805	-				-0.3
3,378,805	-				-0.3
3,379,086	-		Psest_3210	0.41	-0.0
3,379,206	+		Psest_3210	0.59	-0.9
3,379,207	-		Psest_3210	0.59	-0.3
3,379,284	+		Psest_3210	0.71	+1.0
3,379,284	+		Psest_3210	0.71	-1.7
3,379,284	+		Psest_3210	0.71	-3.0
3,379,284	+		Psest_3210	0.71	+0.2
3,379,284	+		Psest_3210	0.71	-0.8
3,379,284	+		Psest_3210	0.71	+1.0
3,379,284	+		Psest_3210	0.71	-0.3
3,379,284	+		Psest_3210	0.71	+1.0
3,379,284	+		Psest_3210	0.71	+0.8
3,379,284	+		Psest_3210	0.71	-0.2
3,379,284	+		Psest_3210	0.71	-0.5
3,379,284	+		Psest_3210	0.71	-1.0
3,379,284	+		Psest_3210	0.71	-1.0
3,379,284	+		Psest_3210	0.71	+0.0
3,379,285	-		Psest_3210	0.71	+0.5
3,379,285	-		Psest_3210	0.71	-0.3
3,379,285	-		Psest_3210	0.71	+0.3
3,379,285	-		Psest_3210	0.71	-0.8
3,379,285	-		Psest_3210	0.71	+2.1
3,379,285	-		Psest_3210	0.71	+0.2
3,379,285	-		Psest_3210	0.71	-1.4
3,379,285	-		Psest_3210	0.71	+0.8
3,379,285	-		Psest_3210	0.71	-0.8
3,379,285	-		Psest_3210	0.71	+0.1
3,379,285	-		Psest_3210	0.71	-1.1
3,379,285	-		Psest_3210	0.71	-1.1
3,379,290	+		Psest_3210	0.72	+0.0
3,379,290	+		Psest_3210	0.72	-0.7
3,379,290	+		Psest_3210	0.72	+0.2
3,379,290	+		Psest_3210	0.72	-0.4
3,379,290	+		Psest_3210	0.72	+0.3
3,379,291	-		Psest_3210	0.72	-0.8
3,379,291	-		Psest_3210	0.72	-0.7
3,379,291	-		Psest_3210	0.72	-0.0
3,379,291	-		Psest_3210	0.72	-0.7
3,379,291	-		Psest_3210	0.72	-0.7
3,379,332	+		Psest_3210	0.78	+0.9
3,379,332	+		Psest_3210	0.78	+0.6
3,379,332	+		Psest_3210	0.78	-1.0
3,379,333	-		Psest_3210	0.78	+0.0
3,379,333	-		Psest_3210	0.78	-1.9
3,379,333	-		Psest_3210	0.78	+0.4
3,379,333	-		Psest_3210	0.78	+1.0
3,379,333	-		Psest_3210	0.78	+1.4
3,379,333	-		Psest_3210	0.78	-1.5
3,379,333	-		Psest_3210	0.78	-0.9
3,379,333	-		Psest_3210	0.78	+0.3
3,379,333	-		Psest_3210	0.78	+0.0
3,379,333	-		Psest_3210	0.78	-2.7
3,379,338	+		Psest_3210	0.79	-1.0
3,379,339	-		Psest_3210	0.79	+0.1
3,379,339	-		Psest_3210	0.79	+0.5
3,379,339	-		Psest_3210	0.79	-0.7
3,379,339	-		Psest_3210	0.79	-1.2
3,379,485	+				+1.3