Experiment: syringaldehyde 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0314 and Psest_0315 are separated by 288 nucleotides Psest_0315 and Psest_0316 are separated by 107 nucleotides Psest_0316 and Psest_0317 are separated by 9 nucleotides Psest_0317 and Psest_0318 are separated by 60 nucleotides
Psest_0314: Psest_0314 - adenosylhomocysteinase, at 337,219 to 338,625
_0314
Psest_0315: Psest_0315 - hypothetical protein, at 338,914 to 339,351
_0315
Psest_0316: Psest_0316 - Cytochrome c556, at 339,459 to 339,905
_0316
Psest_0317: Psest_0317 - Protein of unknown function (DUF1090)., at 339,915 to 340,295
_0317
Psest_0318: Psest_0318 - NAD-dependent DNA ligase (contains BRCT domain type II), at 340,356 to 342,020
_0318
Position (kb) 339
340 Strain fitness (log2 ratio) -2
-1
0
1
2 at 338.645 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.647 kb on - strand at 338.677 kb on - strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.797 kb on + strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.798 kb on - strand at 338.840 kb on + strand at 338.840 kb on + strand at 338.840 kb on + strand at 338.840 kb on + strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.841 kb on - strand at 338.862 kb on + strand at 338.863 kb on - strand at 338.989 kb on + strand, within Psest_0315 at 338.989 kb on + strand, within Psest_0315 at 338.990 kb on - strand, within Psest_0315 at 338.990 kb on - strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.993 kb on + strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 338.994 kb on - strand, within Psest_0315 at 339.060 kb on + strand, within Psest_0315 at 339.060 kb on + strand, within Psest_0315 at 339.251 kb on + strand, within Psest_0315 at 339.251 kb on + strand, within Psest_0315 at 339.251 kb on + strand, within Psest_0315 at 339.252 kb on - strand, within Psest_0315 at 339.252 kb on - strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.277 kb on + strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.278 kb on - strand, within Psest_0315 at 339.283 kb on + strand, within Psest_0315 at 339.425 kb on - strand at 339.503 kb on - strand at 339.503 kb on - strand at 339.561 kb on + strand, within Psest_0316 at 339.562 kb on - strand, within Psest_0316 at 339.562 kb on - strand, within Psest_0316 at 339.562 kb on - strand, within Psest_0316 at 339.916 kb on + strand at 339.917 kb on - strand at 340.032 kb on + strand, within Psest_0317 at 340.055 kb on - strand, within Psest_0317 at 340.308 kb on + strand at 340.308 kb on + strand at 340.308 kb on + strand at 340.308 kb on + strand at 340.309 kb on - strand at 340.309 kb on - strand at 340.309 kb on - strand at 340.327 kb on - strand at 340.371 kb on - strand at 340.371 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 4 mM remove 338,645 - -1.7 338,647 - -2.5 338,647 - +0.8 338,647 - -2.2 338,647 - -0.3 338,647 - +0.8 338,647 - +0.2 338,647 - -0.4 338,647 - +0.1 338,647 - -0.2 338,647 - -0.2 338,677 - -2.2 338,797 + +1.4 338,797 + +0.0 338,797 + +0.9 338,797 + -1.8 338,797 + +0.0 338,797 + -1.1 338,797 + -0.9 338,797 + -0.4 338,798 - +0.6 338,798 - +0.6 338,798 - +0.4 338,798 - +2.2 338,798 - +0.3 338,798 - +0.7 338,798 - +1.0 338,840 + -1.8 338,840 + +1.3 338,840 + -0.9 338,840 + -0.1 338,841 - +2.6 338,841 - +1.9 338,841 - +0.6 338,841 - +0.4 338,841 - +1.2 338,841 - +0.4 338,841 - +0.7 338,841 - -1.5 338,841 - +0.5 338,841 - -0.5 338,862 + +0.2 338,863 - +0.3 338,989 + Psest_0315 0.17 +2.1 338,989 + Psest_0315 0.17 -0.6 338,990 - Psest_0315 0.17 -1.5 338,990 - Psest_0315 0.17 -0.7 338,993 + Psest_0315 0.18 -1.6 338,993 + Psest_0315 0.18 +2.4 338,993 + Psest_0315 0.18 +1.0 338,993 + Psest_0315 0.18 +0.7 338,993 + Psest_0315 0.18 +0.1 338,993 + Psest_0315 0.18 -1.2 338,993 + Psest_0315 0.18 +2.0 338,993 + Psest_0315 0.18 +1.3 338,993 + Psest_0315 0.18 +1.5 338,993 + Psest_0315 0.18 +0.1 338,993 + Psest_0315 0.18 +1.2 338,994 - Psest_0315 0.18 +0.1 338,994 - Psest_0315 0.18 +0.7 338,994 - Psest_0315 0.18 -1.2 338,994 - Psest_0315 0.18 -0.3 338,994 - Psest_0315 0.18 +1.2 338,994 - Psest_0315 0.18 +0.4 338,994 - Psest_0315 0.18 -0.1 338,994 - Psest_0315 0.18 -0.5 338,994 - Psest_0315 0.18 +0.3 338,994 - Psest_0315 0.18 -1.2 338,994 - Psest_0315 0.18 +0.8 338,994 - Psest_0315 0.18 -2.5 338,994 - Psest_0315 0.18 +0.4 338,994 - Psest_0315 0.18 +0.7 339,060 + Psest_0315 0.33 +0.7 339,060 + Psest_0315 0.33 +0.1 339,251 + Psest_0315 0.77 +0.3 339,251 + Psest_0315 0.77 -0.3 339,251 + Psest_0315 0.77 +0.6 339,252 - Psest_0315 0.77 +0.3 339,252 - Psest_0315 0.77 -2.5 339,277 + Psest_0315 0.83 -0.4 339,277 + Psest_0315 0.83 -0.1 339,277 + Psest_0315 0.83 -0.3 339,277 + Psest_0315 0.83 -0.7 339,277 + Psest_0315 0.83 -0.9 339,277 + Psest_0315 0.83 -0.5 339,278 - Psest_0315 0.83 -2.1 339,278 - Psest_0315 0.83 +2.2 339,278 - Psest_0315 0.83 -1.1 339,278 - Psest_0315 0.83 +2.0 339,278 - Psest_0315 0.83 -0.7 339,278 - Psest_0315 0.83 +1.6 339,278 - Psest_0315 0.83 -1.2 339,278 - Psest_0315 0.83 -0.2 339,278 - Psest_0315 0.83 -0.1 339,283 + Psest_0315 0.84 +0.5 339,425 - +0.6 339,503 - +1.3 339,503 - +1.0 339,561 + Psest_0316 0.23 -0.7 339,562 - Psest_0316 0.23 -1.2 339,562 - Psest_0316 0.23 -0.1 339,562 - Psest_0316 0.23 -0.4 339,916 + -0.1 339,917 - -0.1 340,032 + Psest_0317 0.31 -1.8 340,055 - Psest_0317 0.37 +0.3 340,308 + +2.5 340,308 + -0.6 340,308 + -0.8 340,308 + -1.7 340,309 - +0.9 340,309 - -0.6 340,309 - +2.6 340,327 - -0.2 340,371 - -0.6 340,371 - +0.4
Or see this region's nucleotide sequence