Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3207

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
3,375,377	-		Psest_3204	0.88	+1.2
3,375,377	-		Psest_3204	0.88	-0.3
3,375,377	-		Psest_3204	0.88	-0.4
3,375,409	+				+0.2
3,375,410	-				-1.9
3,375,410	-				+0.0
3,375,499	-				-1.9
3,375,538	+		Psest_3205	0.16	+2.4
3,375,538	+		Psest_3205	0.16	+0.7
3,375,538	+		Psest_3205	0.16	+0.8
3,375,538	+		Psest_3205	0.16	+1.8
3,375,538	+		Psest_3205	0.16	+0.5
3,375,538	+		Psest_3205	0.16	-1.3
3,375,538	+		Psest_3205	0.16	+0.4
3,375,538	+		Psest_3205	0.16	+0.1
3,375,538	+		Psest_3205	0.16	+0.3
3,375,538	+		Psest_3205	0.16	-0.4
3,375,539	-		Psest_3205	0.16	-1.0
3,375,539	-		Psest_3205	0.16	+0.0
3,375,539	-		Psest_3205	0.16	-1.0
3,375,539	-		Psest_3205	0.16	+3.0
3,375,539	-		Psest_3205	0.16	+1.0
3,375,539	-		Psest_3205	0.16	-0.5
3,375,539	-		Psest_3205	0.16	+0.5
3,375,539	-		Psest_3205	0.16	-0.8
3,375,539	-		Psest_3205	0.16	+1.6
3,375,539	-		Psest_3205	0.16	+0.7
3,375,539	-		Psest_3205	0.16	-1.0
3,375,539	-		Psest_3205	0.16	-1.1
3,375,539	-		Psest_3205	0.16	+2.6
3,375,539	-		Psest_3205	0.16	-1.0
3,375,539	-		Psest_3205	0.16	-0.7
3,375,540	+		Psest_3205	0.17	+1.3
3,375,605	-		Psest_3205	0.34	-1.4
3,375,765	-		Psest_3205	0.77	+1.4
3,375,889	+				+1.0
3,376,068	-		Psest_3206	0.47	+0.6
3,376,068	-		Psest_3206	0.47	+3.4
3,376,068	-		Psest_3206	0.47	+0.1
3,376,068	-		Psest_3206	0.47	-0.9
3,376,068	-		Psest_3206	0.47	+1.8
3,376,068	-		Psest_3206	0.47	+1.8
3,376,130	+		Psest_3206	0.68	-1.0
3,376,130	+		Psest_3206	0.68	+2.4
3,376,130	+		Psest_3206	0.68	-0.2
3,376,143	-		Psest_3206	0.73	-1.7
3,376,303	+		Psest_3207	0.25	-0.2
3,376,304	-		Psest_3207	0.25	+0.1
3,376,304	-		Psest_3207	0.25	-0.5
3,376,304	-		Psest_3207	0.25	+2.0
3,376,304	-		Psest_3207	0.25	+0.9
3,376,304	-		Psest_3207	0.25	-0.0
3,376,304	-		Psest_3207	0.25	+1.1
3,376,304	-		Psest_3207	0.25	+1.3
3,376,304	-		Psest_3207	0.25	-0.3
3,376,304	-		Psest_3207	0.25	+0.9
3,376,304	-		Psest_3207	0.25	-0.0
3,376,309	+		Psest_3207	0.27	-0.4
3,376,310	-		Psest_3207	0.27	+1.5
3,376,310	-		Psest_3207	0.27	+2.2
3,376,555	+				+0.6
3,376,555	+				+0.7
3,376,555	+				-0.8
3,376,555	+				-0.9
3,376,563	-				-2.1
3,376,563	-				-3.2
3,376,600	+				+0.5
3,376,601	-				-0.9
3,376,671	+				-0.3
3,376,671	+				+0.7
3,376,671	+				+0.4
3,376,672	-				-1.8
3,376,672	-				+0.7
3,376,710	+				-1.1
3,376,710	+				-1.9
3,376,710	+				-1.0
3,376,710	+				-1.4
3,376,710	+				-0.3
3,376,710	+				+0.1
3,376,710	+				+0.7
3,376,711	-				-0.8
3,376,711	-				+0.0
3,376,711	-				-2.2
3,376,711	-				-0.0
3,376,711	-				+1.9
3,376,711	-				-0.8
3,376,711	-				+1.6
3,376,711	-				+0.0
3,376,711	-				+0.9
3,376,711	-				+0.8
3,376,719	+				-0.9
3,376,720	-				-1.0
3,376,720	-				+0.0
3,376,766	-				-0.5
3,376,809	+				-0.4
3,376,810	-				-2.5
3,376,885	+		Psest_3208	0.14	+2.4
3,376,885	+		Psest_3208	0.14	+0.9
3,376,885	+		Psest_3208	0.14	+2.5
3,376,885	+		Psest_3208	0.14	+0.2
3,376,885	+		Psest_3208	0.14	+2.8
3,376,885	+		Psest_3208	0.14	+0.5
3,376,885	+		Psest_3208	0.14	-0.8
3,376,885	+		Psest_3208	0.14	-1.4
3,376,886	-		Psest_3208	0.14	+0.2
3,376,886	-		Psest_3208	0.14	-1.3
3,376,886	-		Psest_3208	0.14	+1.3
3,376,886	-		Psest_3208	0.14	-0.4
3,376,886	-		Psest_3208	0.14	+1.4
3,376,886	-		Psest_3208	0.14	+0.2
3,376,986	+		Psest_3208	0.27	+1.2
3,376,986	+		Psest_3208	0.27	+0.1
3,376,986	+		Psest_3208	0.27	+0.6
3,376,986	+		Psest_3208	0.27	+1.4
3,376,987	-		Psest_3208	0.28	-0.2
3,376,987	-		Psest_3208	0.28	-0.3
3,377,110	+		Psest_3208	0.44	+0.7
3,377,110	+		Psest_3208	0.44	-1.0
3,377,111	-		Psest_3208	0.44	-0.1
3,377,203	-		Psest_3208	0.56	-1.3
3,377,313	+		Psest_3208	0.71	+2.7
3,377,313	+		Psest_3208	0.71	-0.3
3,377,313	+		Psest_3208	0.71	-0.9
3,377,313	+		Psest_3208	0.71	+1.6
3,377,313	+		Psest_3208	0.71	+0.6
3,377,314	-		Psest_3208	0.71	+0.5
3,377,314	-		Psest_3208	0.71	+0.8
3,377,314	-		Psest_3208	0.71	-1.4
3,377,415	+		Psest_3208	0.84	+1.5
3,377,415	+		Psest_3208	0.84	-0.7
3,377,415	+		Psest_3208	0.84	-0.5
3,377,415	+		Psest_3208	0.84	+0.0
3,377,415	+		Psest_3208	0.84	+2.7
3,377,416	-		Psest_3208	0.84	-1.3
3,377,532	+				+0.5
3,377,532	+				-0.6
3,377,532	+				+1.2
3,377,532	+				-0.5
3,377,533	-				+0.6