Experiment: syringaldehyde 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2465 and Psest_2466 are separated by 226 nucleotides Psest_2466 and Psest_2467 overlap by 4 nucleotides Psest_2467 and Psest_2468 are separated by 40 nucleotides
Psest_2465: Psest_2465 - hypothetical protein, at 2,636,275 to 2,637,078
_2465
Psest_2466: Psest_2466 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,637,305 to 2,638,162
_2466
Psest_2467: Psest_2467 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 2,638,159 to 2,639,058
_2467
Psest_2468: Psest_2468 - uncharacterized domain 1, at 2,639,099 to 2,639,542
_2468
Position (kb)
2637
2638
2639 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2636.583 kb on - strand, within Psest_2465 at 2636.583 kb on - strand, within Psest_2465 at 2636.612 kb on + strand, within Psest_2465 at 2636.660 kb on + strand, within Psest_2465 at 2636.660 kb on + strand, within Psest_2465 at 2636.684 kb on + strand, within Psest_2465 at 2636.826 kb on + strand, within Psest_2465 at 2636.826 kb on + strand, within Psest_2465 at 2636.827 kb on - strand, within Psest_2465 at 2636.927 kb on + strand, within Psest_2465 at 2636.928 kb on - strand, within Psest_2465 at 2636.928 kb on - strand, within Psest_2465 at 2637.078 kb on + strand at 2637.283 kb on + strand at 2637.283 kb on + strand at 2637.571 kb on + strand, within Psest_2466 at 2637.572 kb on - strand, within Psest_2466 at 2637.572 kb on - strand, within Psest_2466 at 2637.572 kb on - strand, within Psest_2466 at 2637.574 kb on - strand, within Psest_2466 at 2637.612 kb on - strand, within Psest_2466 at 2637.612 kb on - strand, within Psest_2466 at 2637.771 kb on + strand, within Psest_2466 at 2637.772 kb on - strand, within Psest_2466 at 2637.772 kb on - strand, within Psest_2466 at 2637.788 kb on + strand, within Psest_2466 at 2637.789 kb on - strand, within Psest_2466 at 2637.908 kb on + strand, within Psest_2466 at 2637.909 kb on - strand, within Psest_2466 at 2637.924 kb on + strand, within Psest_2466 at 2637.924 kb on + strand, within Psest_2466 at 2637.940 kb on - strand, within Psest_2466 at 2637.940 kb on - strand, within Psest_2466 at 2637.940 kb on - strand, within Psest_2466 at 2637.940 kb on - strand, within Psest_2466 at 2638.177 kb on - strand at 2638.310 kb on + strand, within Psest_2467 at 2638.310 kb on + strand, within Psest_2467 at 2638.311 kb on - strand, within Psest_2467 at 2638.416 kb on - strand, within Psest_2467 at 2638.488 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.490 kb on + strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.491 kb on - strand, within Psest_2467 at 2638.645 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.703 kb on + strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.704 kb on - strand, within Psest_2467 at 2638.920 kb on - strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.959 kb on + strand, within Psest_2467 at 2638.960 kb on - strand, within Psest_2467 at 2639.080 kb on + strand at 2639.081 kb on - strand at 2639.081 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 4 mM remove 2,636,583 - Psest_2465 0.38 +0.5 2,636,583 - Psest_2465 0.38 +0.7 2,636,612 + Psest_2465 0.42 -1.9 2,636,660 + Psest_2465 0.48 +2.2 2,636,660 + Psest_2465 0.48 +1.1 2,636,684 + Psest_2465 0.51 +1.9 2,636,826 + Psest_2465 0.69 +1.4 2,636,826 + Psest_2465 0.69 -2.2 2,636,827 - Psest_2465 0.69 -0.1 2,636,927 + Psest_2465 0.81 -0.5 2,636,928 - Psest_2465 0.81 +1.1 2,636,928 - Psest_2465 0.81 +0.3 2,637,078 + -1.8 2,637,283 + -0.1 2,637,283 + +1.7 2,637,571 + Psest_2466 0.31 +2.7 2,637,572 - Psest_2466 0.31 -0.0 2,637,572 - Psest_2466 0.31 +0.1 2,637,572 - Psest_2466 0.31 +0.1 2,637,574 - Psest_2466 0.31 -0.3 2,637,612 - Psest_2466 0.36 +1.4 2,637,612 - Psest_2466 0.36 +1.0 2,637,771 + Psest_2466 0.54 -1.7 2,637,772 - Psest_2466 0.54 -0.8 2,637,772 - Psest_2466 0.54 -0.6 2,637,788 + Psest_2466 0.56 +0.7 2,637,789 - Psest_2466 0.56 +0.3 2,637,908 + Psest_2466 0.70 -0.7 2,637,909 - Psest_2466 0.70 +0.9 2,637,924 + Psest_2466 0.72 +1.1 2,637,924 + Psest_2466 0.72 -0.2 2,637,940 - Psest_2466 0.74 +1.6 2,637,940 - Psest_2466 0.74 +1.5 2,637,940 - Psest_2466 0.74 +0.7 2,637,940 - Psest_2466 0.74 -0.2 2,638,177 - -1.2 2,638,310 + Psest_2467 0.17 +1.4 2,638,310 + Psest_2467 0.17 +1.6 2,638,311 - Psest_2467 0.17 +0.8 2,638,416 - Psest_2467 0.29 +0.4 2,638,488 + Psest_2467 0.37 +0.2 2,638,490 + Psest_2467 0.37 +0.8 2,638,490 + Psest_2467 0.37 -0.4 2,638,490 + Psest_2467 0.37 +1.0 2,638,491 - Psest_2467 0.37 -0.4 2,638,491 - Psest_2467 0.37 +0.3 2,638,491 - Psest_2467 0.37 +0.8 2,638,491 - Psest_2467 0.37 +1.2 2,638,645 + Psest_2467 0.54 -0.1 2,638,703 + Psest_2467 0.60 -2.9 2,638,703 + Psest_2467 0.60 -2.3 2,638,703 + Psest_2467 0.60 -1.1 2,638,703 + Psest_2467 0.60 -1.3 2,638,703 + Psest_2467 0.60 +0.0 2,638,703 + Psest_2467 0.60 +0.3 2,638,703 + Psest_2467 0.60 -1.4 2,638,703 + Psest_2467 0.60 -0.7 2,638,704 - Psest_2467 0.61 +1.2 2,638,704 - Psest_2467 0.61 +0.1 2,638,704 - Psest_2467 0.61 +0.8 2,638,704 - Psest_2467 0.61 +1.7 2,638,920 - Psest_2467 0.85 -0.4 2,638,959 + Psest_2467 0.89 -0.9 2,638,959 + Psest_2467 0.89 +0.7 2,638,960 - Psest_2467 0.89 +0.0 2,639,080 + -0.1 2,639,081 - +0.1 2,639,081 - -0.0
Or see this region's nucleotide sequence