Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1914

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
2,020,496	-		Psest_1913	0.13	-0.1
2,020,798	+		Psest_1913	0.45	+1.3
2,020,893	+		Psest_1913	0.55	-0.6
2,020,893	+		Psest_1913	0.55	-0.8
2,020,893	+		Psest_1913	0.55	+0.3
2,020,894	-		Psest_1913	0.55	+1.0
2,021,210	+		Psest_1913	0.88	+1.5
2,021,280	+				-0.5
2,021,280	+				-0.3
2,021,280	+				-2.3
2,021,402	-				+0.4
2,021,402	-				+1.2
2,021,407	-				-2.6
2,021,480	-				+0.4
2,021,480	-				-0.3
2,021,636	+		Psest_1914	0.27	+0.5
2,021,778	+		Psest_1914	0.45	-0.8
2,021,778	+		Psest_1914	0.45	+2.0
2,021,778	+		Psest_1914	0.45	+1.0
2,021,778	+		Psest_1914	0.45	+1.1
2,021,778	+		Psest_1914	0.45	-0.4
2,021,778	+		Psest_1914	0.45	-0.6
2,021,778	+		Psest_1914	0.45	+0.3
2,021,779	-		Psest_1914	0.46	-0.3
2,021,779	-		Psest_1914	0.46	+1.5
2,021,779	-		Psest_1914	0.46	+1.3
2,021,936	-		Psest_1914	0.66	+0.5
2,021,936	-		Psest_1914	0.66	+0.4
2,021,994	-		Psest_1914	0.74	+1.2
2,022,015	+		Psest_1914	0.77	+1.8
2,022,015	+		Psest_1914	0.77	+0.2
2,022,016	-		Psest_1914	0.77	+1.9
2,022,016	-		Psest_1914	0.77	+1.9
2,022,016	-		Psest_1914	0.77	-0.5
2,022,016	-		Psest_1914	0.77	-0.2
2,022,016	-		Psest_1914	0.77	-0.6
2,022,266	+				+1.7
2,022,266	+				+0.3
2,022,266	+				-0.0
2,022,267	-				-0.7
2,022,267	-				-0.6
2,022,267	-				-0.6
2,022,267	-				-0.8
2,022,267	-				+0.8
2,022,267	-				+0.5
2,022,267	-				-0.1
2,022,267	-				-0.2
2,022,414	+		Psest_1915	0.18	+0.2
2,022,415	-		Psest_1915	0.18	-1.2
2,022,415	-		Psest_1915	0.18	-1.6
2,022,659	-		Psest_1915	0.38	-0.5
2,022,661	+		Psest_1915	0.38	+1.4
2,022,661	+		Psest_1915	0.38	-0.3
2,022,661	+		Psest_1915	0.38	-0.6
2,022,662	-		Psest_1915	0.38	-0.0
2,022,698	+		Psest_1915	0.41	-0.5
2,022,817	+		Psest_1915	0.51	-0.4
2,022,830	-		Psest_1915	0.52	+1.5
2,022,830	-		Psest_1915	0.52	-0.4
2,023,096	+		Psest_1915	0.74	+0.2
2,023,096	+		Psest_1915	0.74	+0.8
2,023,125	+		Psest_1915	0.76	-0.5