Experiment: syringaldehyde 4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0016 and Psest_0017 overlap by 4 nucleotides Psest_0017 and Psest_0018 overlap by 4 nucleotides Psest_0018 and Psest_0019 are separated by 120 nucleotides
Psest_0016: Psest_0016 - ectoine/hydroxyectoine ABC transporter, ATP-binding protein, at 16,798 to 17,634
_0016
Psest_0017: Psest_0017 - ectoine/hydroxyectoine ABC transporter, permease protein EhuD, at 17,631 to 18,290
_0017
Psest_0018: Psest_0018 - ectoine/hydroxyectoine ABC transporter, permease protein EhuC, at 18,287 to 18,946
_0018
Psest_0019: Psest_0019 - ectoine/hydroxyectoine ABC transporter solute-binding protein, at 19,067 to 19,924
_0019
Position (kb) 18
19 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.287 kb on + strand, within Psest_0016 at 17.288 kb on - strand, within Psest_0016 at 17.288 kb on - strand, within Psest_0016 at 17.288 kb on - strand, within Psest_0016 at 17.416 kb on + strand, within Psest_0016 at 17.417 kb on - strand, within Psest_0016 at 17.628 kb on + strand at 17.629 kb on - strand at 17.629 kb on - strand at 17.833 kb on + strand, within Psest_0017 at 17.833 kb on + strand, within Psest_0017 at 17.833 kb on + strand, within Psest_0017 at 17.834 kb on - strand, within Psest_0017 at 17.834 kb on - strand, within Psest_0017 at 17.834 kb on - strand, within Psest_0017 at 17.834 kb on - strand, within Psest_0017 at 17.983 kb on + strand, within Psest_0017 at 17.983 kb on + strand, within Psest_0017 at 17.983 kb on + strand, within Psest_0017 at 17.983 kb on + strand, within Psest_0017 at 17.984 kb on - strand, within Psest_0017 at 17.992 kb on + strand, within Psest_0017 at 18.046 kb on + strand, within Psest_0017 at 18.047 kb on - strand, within Psest_0017 at 18.057 kb on + strand, within Psest_0017 at 18.057 kb on + strand, within Psest_0017 at 18.058 kb on - strand, within Psest_0017 at 18.058 kb on - strand, within Psest_0017 at 18.058 kb on - strand, within Psest_0017 at 18.058 kb on - strand, within Psest_0017 at 18.061 kb on + strand, within Psest_0017 at 18.061 kb on + strand, within Psest_0017 at 18.061 kb on + strand, within Psest_0017 at 18.061 kb on + strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.062 kb on - strand, within Psest_0017 at 18.073 kb on + strand, within Psest_0017 at 18.073 kb on + strand, within Psest_0017 at 18.074 kb on - strand, within Psest_0017 at 18.074 kb on - strand, within Psest_0017 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.745 kb on - strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 19.494 kb on + strand, within Psest_0019 at 19.494 kb on + strand, within Psest_0019 at 19.495 kb on - strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.761 kb on + strand, within Psest_0019 at 19.946 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 4 mM remove 17,287 + Psest_0016 0.58 +0.4 17,287 + Psest_0016 0.58 +0.8 17,287 + Psest_0016 0.58 +0.2 17,287 + Psest_0016 0.58 -1.3 17,287 + Psest_0016 0.58 +1.2 17,287 + Psest_0016 0.58 +2.2 17,287 + Psest_0016 0.58 -1.8 17,288 - Psest_0016 0.59 -0.9 17,288 - Psest_0016 0.59 -0.6 17,288 - Psest_0016 0.59 +1.1 17,416 + Psest_0016 0.74 +1.7 17,417 - Psest_0016 0.74 -0.6 17,628 + -0.6 17,629 - +0.2 17,629 - -0.8 17,833 + Psest_0017 0.31 -0.8 17,833 + Psest_0017 0.31 -0.1 17,833 + Psest_0017 0.31 -1.0 17,834 - Psest_0017 0.31 -2.1 17,834 - Psest_0017 0.31 -0.1 17,834 - Psest_0017 0.31 -0.5 17,834 - Psest_0017 0.31 -1.5 17,983 + Psest_0017 0.53 -0.4 17,983 + Psest_0017 0.53 +0.8 17,983 + Psest_0017 0.53 -1.4 17,983 + Psest_0017 0.53 -0.1 17,984 - Psest_0017 0.53 -0.4 17,992 + Psest_0017 0.55 -1.7 18,046 + Psest_0017 0.63 -1.5 18,047 - Psest_0017 0.63 +2.0 18,057 + Psest_0017 0.65 -0.5 18,057 + Psest_0017 0.65 +0.1 18,058 - Psest_0017 0.65 +0.3 18,058 - Psest_0017 0.65 +1.6 18,058 - Psest_0017 0.65 -1.5 18,058 - Psest_0017 0.65 +0.8 18,061 + Psest_0017 0.65 +1.8 18,061 + Psest_0017 0.65 +0.2 18,061 + Psest_0017 0.65 +1.3 18,061 + Psest_0017 0.65 -0.2 18,062 - Psest_0017 0.65 +0.8 18,062 - Psest_0017 0.65 +0.7 18,062 - Psest_0017 0.65 -0.5 18,062 - Psest_0017 0.65 +1.9 18,062 - Psest_0017 0.65 +0.4 18,062 - Psest_0017 0.65 -2.8 18,062 - Psest_0017 0.65 +0.4 18,062 - Psest_0017 0.65 -0.5 18,062 - Psest_0017 0.65 +0.5 18,062 - Psest_0017 0.65 +0.5 18,062 - Psest_0017 0.65 +0.1 18,062 - Psest_0017 0.65 -0.0 18,073 + Psest_0017 0.67 +0.7 18,073 + Psest_0017 0.67 -0.0 18,074 - Psest_0017 0.67 +0.2 18,074 - Psest_0017 0.67 -1.0 18,375 + Psest_0018 0.13 +2.5 18,375 + Psest_0018 0.13 +0.2 18,375 + Psest_0018 0.13 -0.8 18,375 + Psest_0018 0.13 +0.9 18,375 + Psest_0018 0.13 +0.7 18,375 + Psest_0018 0.13 +1.3 18,375 + Psest_0018 0.13 +2.4 18,375 + Psest_0018 0.13 +0.1 18,376 - Psest_0018 0.13 +1.4 18,376 - Psest_0018 0.13 +1.4 18,376 - Psest_0018 0.13 +2.9 18,376 - Psest_0018 0.13 +0.9 18,376 - Psest_0018 0.13 +1.1 18,376 - Psest_0018 0.13 -1.7 18,744 + Psest_0018 0.69 +0.5 18,744 + Psest_0018 0.69 -0.7 18,744 + Psest_0018 0.69 -1.0 18,745 - Psest_0018 0.69 -0.1 18,795 + Psest_0018 0.77 -0.3 18,795 + Psest_0018 0.77 -0.3 18,795 + Psest_0018 0.77 +0.4 18,795 + Psest_0018 0.77 +1.8 18,795 + Psest_0018 0.77 +0.9 18,795 + Psest_0018 0.77 -1.6 18,795 + Psest_0018 0.77 -0.5 18,795 + Psest_0018 0.77 +0.5 18,795 + Psest_0018 0.77 -1.2 18,795 + Psest_0018 0.77 -2.7 18,795 + Psest_0018 0.77 +3.8 18,795 + Psest_0018 0.77 +1.2 18,795 + Psest_0018 0.77 +0.4 18,795 + Psest_0018 0.77 +1.8 18,795 + Psest_0018 0.77 +1.4 18,795 + Psest_0018 0.77 -1.2 18,796 - Psest_0018 0.77 +0.2 18,796 - Psest_0018 0.77 +0.4 18,796 - Psest_0018 0.77 -0.2 19,494 + Psest_0019 0.50 -1.2 19,494 + Psest_0019 0.50 +0.3 19,495 - Psest_0019 0.50 +1.6 19,571 + Psest_0019 0.59 -2.3 19,571 + Psest_0019 0.59 +0.9 19,571 + Psest_0019 0.59 -0.5 19,571 + Psest_0019 0.59 +0.6 19,572 - Psest_0019 0.59 +1.0 19,572 - Psest_0019 0.59 +0.3 19,572 - Psest_0019 0.59 +2.0 19,599 + Psest_0019 0.62 +0.5 19,599 + Psest_0019 0.62 +0.1 19,599 + Psest_0019 0.62 -1.7 19,599 + Psest_0019 0.62 +1.1 19,599 + Psest_0019 0.62 -0.4 19,599 + Psest_0019 0.62 +0.3 19,599 + Psest_0019 0.62 +0.2 19,599 + Psest_0019 0.62 -2.2 19,599 + Psest_0019 0.62 +1.9 19,599 + Psest_0019 0.62 +0.2 19,599 + Psest_0019 0.62 -3.7 19,599 + Psest_0019 0.62 +0.4 19,600 - Psest_0019 0.62 +1.2 19,600 - Psest_0019 0.62 +1.6 19,600 - Psest_0019 0.62 +0.5 19,600 - Psest_0019 0.62 +1.6 19,600 - Psest_0019 0.62 -0.0 19,600 - Psest_0019 0.62 -2.3 19,600 - Psest_0019 0.62 -1.3 19,600 - Psest_0019 0.62 -0.7 19,600 - Psest_0019 0.62 +0.4 19,600 - Psest_0019 0.62 -0.4 19,600 - Psest_0019 0.62 -1.9 19,600 - Psest_0019 0.62 -0.2 19,600 - Psest_0019 0.62 +0.1 19,600 - Psest_0019 0.62 +0.8 19,600 - Psest_0019 0.62 -1.3 19,600 - Psest_0019 0.62 -0.8 19,600 - Psest_0019 0.62 +0.5 19,600 - Psest_0019 0.62 -0.3 19,600 - Psest_0019 0.62 +0.9 19,600 - Psest_0019 0.62 +0.2 19,600 - Psest_0019 0.62 +0.8 19,600 - Psest_0019 0.62 +1.7 19,600 - Psest_0019 0.62 +0.4 19,600 - Psest_0019 0.62 +0.9 19,600 - Psest_0019 0.62 -1.8 19,600 - Psest_0019 0.62 +0.7 19,600 - Psest_0019 0.62 -1.2 19,600 - Psest_0019 0.62 +0.3 19,600 - Psest_0019 0.62 -0.6 19,600 - Psest_0019 0.62 -0.7 19,600 - Psest_0019 0.62 +1.7 19,600 - Psest_0019 0.62 +0.3 19,600 - Psest_0019 0.62 +0.6 19,715 + Psest_0019 0.76 +0.3 19,715 + Psest_0019 0.76 -0.5 19,715 + Psest_0019 0.76 -0.7 19,761 + Psest_0019 0.81 +0.0 19,946 + -0.4
Or see this region's nucleotide sequence