Experiment: syringaldehyde 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0736 and Psest_0737 are separated by 189 nucleotides Psest_0737 and Psest_0738 are separated by 13 nucleotides
Psest_0736: Psest_0736 - Methyl-accepting chemotaxis protein, at 808,143 to 810,065
_0736
Psest_0737: Psest_0737 - Cu(I)-responsive transcriptional regulator, at 810,255 to 810,698
_0737
Psest_0738: Psest_0738 - copper-(or silver)-translocating P-type ATPase, at 810,712 to 813,090
_0738
Position (kb) 810
811 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 809.356 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.461 kb on + strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.462 kb on - strand, within Psest_0736 at 809.498 kb on + strand, within Psest_0736 at 809.498 kb on + strand, within Psest_0736 at 809.499 kb on - strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.500 kb on + strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand, within Psest_0736 at 809.501 kb on - strand at 809.501 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.516 kb on - strand, within Psest_0736 at 809.584 kb on + strand, within Psest_0736 at 809.585 kb on - strand, within Psest_0736 at 809.585 kb on - strand, within Psest_0736 at 809.686 kb on + strand, within Psest_0736 at 809.686 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.809 kb on + strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 809.810 kb on - strand, within Psest_0736 at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.059 kb on + strand at 810.060 kb on - strand at 810.060 kb on - strand at 810.077 kb on + strand at 810.077 kb on + strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.078 kb on - strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.084 kb on + strand at 810.085 kb on - strand at 810.085 kb on - strand at 810.085 kb on - strand at 810.152 kb on - strand at 810.165 kb on + strand at 810.165 kb on + strand at 810.166 kb on - strand at 810.166 kb on - strand at 810.166 kb on - strand at 810.641 kb on - strand, within Psest_0737 at 810.757 kb on + strand at 810.845 kb on + strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 810.846 kb on - strand at 811.374 kb on - strand, within Psest_0738 at 811.465 kb on + strand, within Psest_0738 at 811.465 kb on + strand, within Psest_0738 at 811.466 kb on - strand, within Psest_0738 at 811.466 kb on - strand at 811.466 kb on - strand, within Psest_0738 at 811.466 kb on - strand, within Psest_0738 at 811.466 kb on - strand, within Psest_0738 at 811.638 kb on + strand, within Psest_0738
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 3 mM remove 809,356 + Psest_0736 0.63 +0.8 809,461 + Psest_0736 0.69 +1.5 809,461 + Psest_0736 0.69 +0.2 809,461 + Psest_0736 0.69 -0.9 809,461 + Psest_0736 0.69 +0.3 809,461 + Psest_0736 0.69 +0.6 809,461 + Psest_0736 0.69 +0.3 809,461 + Psest_0736 0.69 +0.2 809,461 + Psest_0736 0.69 -0.8 809,461 + Psest_0736 0.69 +0.3 809,462 - Psest_0736 0.69 +1.2 809,462 - Psest_0736 0.69 +2.8 809,462 - Psest_0736 0.69 -0.7 809,462 - Psest_0736 0.69 +1.7 809,462 - Psest_0736 0.69 -0.7 809,462 - Psest_0736 0.69 +0.1 809,498 + Psest_0736 0.70 -0.4 809,498 + Psest_0736 0.70 -0.3 809,499 - Psest_0736 0.71 -2.1 809,500 + Psest_0736 0.71 +0.0 809,500 + Psest_0736 0.71 +1.1 809,500 + Psest_0736 0.71 +0.2 809,501 - Psest_0736 0.71 -0.3 809,501 - Psest_0736 0.71 -1.1 809,501 - Psest_0736 0.71 -1.0 809,501 - Psest_0736 0.71 +0.2 809,501 - -0.8 809,501 - Psest_0736 0.71 -0.6 809,516 - Psest_0736 0.71 -3.2 809,516 - Psest_0736 0.71 -1.2 809,516 - Psest_0736 0.71 +0.1 809,584 + Psest_0736 0.75 +1.0 809,585 - Psest_0736 0.75 +0.1 809,585 - Psest_0736 0.75 +0.4 809,686 + Psest_0736 0.80 +0.8 809,686 + Psest_0736 0.80 +0.7 809,809 + Psest_0736 0.87 +1.3 809,809 + Psest_0736 0.87 -0.9 809,809 + Psest_0736 0.87 +2.8 809,809 + Psest_0736 0.87 -0.0 809,809 + Psest_0736 0.87 -0.2 809,810 - Psest_0736 0.87 -2.4 809,810 - Psest_0736 0.87 +0.1 809,810 - Psest_0736 0.87 -0.6 810,059 + -0.4 810,059 + -0.1 810,059 + -0.3 810,059 + -0.6 810,059 + +1.7 810,060 - -0.3 810,060 - -0.5 810,077 + -0.2 810,077 + -0.8 810,078 - +1.5 810,078 - -0.3 810,078 - +1.2 810,078 - +0.9 810,078 - -0.2 810,084 + +1.3 810,084 + +0.2 810,084 + -0.7 810,084 + -0.9 810,085 - +1.6 810,085 - -2.2 810,085 - -0.1 810,152 - +3.1 810,165 + +0.6 810,165 + -0.3 810,166 - -0.1 810,166 - +0.5 810,166 - +0.8 810,641 - Psest_0737 0.87 -1.2 810,757 + +0.7 810,845 + -0.5 810,846 - +2.2 810,846 - -0.7 810,846 - -1.2 810,846 - -0.2 810,846 - +1.2 810,846 - +0.6 810,846 - -1.8 810,846 - +2.6 810,846 - -0.9 811,374 - Psest_0738 0.28 -2.6 811,465 + Psest_0738 0.32 -0.3 811,465 + Psest_0738 0.32 -3.1 811,466 - Psest_0738 0.32 -0.0 811,466 - +2.3 811,466 - Psest_0738 0.32 -1.5 811,466 - Psest_0738 0.32 -1.2 811,466 - Psest_0738 0.32 +2.1 811,638 + Psest_0738 0.39 -0.4
Or see this region's nucleotide sequence