Experiment: syringaldehyde 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0680 and Psest_0681 overlap by 4 nucleotides Psest_0681 and Psest_0682 are separated by 82 nucleotides
Psest_0680: Psest_0680 - N-acetylmuramoyl-L-alanine amidase, at 742,290 to 743,726
_0680
Psest_0681: Psest_0681 - DNA mismatch repair protein MutL, at 743,723 to 745,600
_0681
Psest_0682: Psest_0682 - tRNA dimethylallyltransferase, at 745,683 to 746,654
_0682
Position (kb) 743
744
745
746 Strain fitness (log2 ratio) -2
-1
0
1
2 at 743.521 kb on - strand, within Psest_0680 at 743.920 kb on + strand, within Psest_0681 at 744.174 kb on + strand, within Psest_0681 at 744.174 kb on + strand, within Psest_0681 at 744.194 kb on - strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.494 kb on + strand, within Psest_0681 at 744.495 kb on - strand, within Psest_0681 at 744.495 kb on - strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.500 kb on + strand, within Psest_0681 at 744.501 kb on - strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.058 kb on + strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.059 kb on - strand, within Psest_0681 at 745.060 kb on + strand, within Psest_0681 at 745.060 kb on + strand, within Psest_0681 at 745.100 kb on - strand, within Psest_0681 at 745.128 kb on - strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.376 kb on + strand, within Psest_0681 at 745.377 kb on - strand, within Psest_0681 at 745.416 kb on + strand at 745.498 kb on + strand at 745.657 kb on - strand at 745.657 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 3 mM remove 743,521 - Psest_0680 0.86 -0.8 743,920 + Psest_0681 0.10 -1.9 744,174 + Psest_0681 0.24 +0.3 744,174 + Psest_0681 0.24 +0.0 744,194 - Psest_0681 0.25 +0.9 744,494 + Psest_0681 0.41 -0.1 744,494 + Psest_0681 0.41 +0.2 744,494 + Psest_0681 0.41 -0.4 744,495 - Psest_0681 0.41 +0.2 744,495 - Psest_0681 0.41 +0.5 744,500 + Psest_0681 0.41 -1.0 744,500 + Psest_0681 0.41 -0.9 744,500 + Psest_0681 0.41 -0.8 744,500 + Psest_0681 0.41 +0.4 744,501 - Psest_0681 0.41 +0.9 745,058 + Psest_0681 0.71 +0.4 745,058 + Psest_0681 0.71 -1.4 745,058 + Psest_0681 0.71 +0.2 745,058 + Psest_0681 0.71 -0.0 745,058 + Psest_0681 0.71 -1.7 745,059 - Psest_0681 0.71 -0.9 745,059 - Psest_0681 0.71 +1.7 745,059 - Psest_0681 0.71 -0.2 745,059 - Psest_0681 0.71 +0.7 745,059 - Psest_0681 0.71 -1.8 745,059 - Psest_0681 0.71 -0.2 745,059 - Psest_0681 0.71 +0.3 745,059 - Psest_0681 0.71 +1.2 745,059 - Psest_0681 0.71 -0.3 745,059 - Psest_0681 0.71 -1.8 745,059 - Psest_0681 0.71 +0.7 745,059 - Psest_0681 0.71 -1.1 745,059 - Psest_0681 0.71 +0.7 745,059 - Psest_0681 0.71 +0.9 745,060 + Psest_0681 0.71 +1.3 745,060 + Psest_0681 0.71 +1.0 745,100 - Psest_0681 0.73 +0.1 745,128 - Psest_0681 0.75 -1.0 745,376 + Psest_0681 0.88 -1.2 745,376 + Psest_0681 0.88 +1.9 745,376 + Psest_0681 0.88 +0.3 745,377 - Psest_0681 0.88 +0.8 745,416 + +0.1 745,498 + +0.5 745,657 - +2.0 745,657 - -1.5
Or see this region's nucleotide sequence