Experiment: syringaldehyde 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0525 and Psest_0526 are separated by 263 nucleotides Psest_0526 and Psest_0527 are separated by 66 nucleotides Psest_0527 and Psest_0528 are separated by 100 nucleotides
Psest_0525: Psest_0525 - leucyl-tRNA synthetase, eubacterial and mitochondrial family, at 576,943 to 579,549
_0525
Psest_0526: Psest_0526 - hypothetical protein, at 579,813 to 580,262
_0526
Psest_0527: Psest_0527 - Uncharacterized conserved protein, at 580,329 to 581,102
_0527
Psest_0528: Psest_0528 - apolipoprotein N-acyltransferase, at 581,203 to 582,717
_0528
Position (kb) 579
580
581 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.772 kb on + strand at 579.773 kb on - strand at 579.773 kb on - strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.978 kb on + strand, within Psest_0526 at 579.979 kb on - strand, within Psest_0526 at 580.244 kb on + strand at 580.244 kb on + strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.341 kb on + strand at 580.342 kb on - strand at 580.492 kb on + strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.638 kb on + strand, within Psest_0527 at 580.638 kb on + strand, within Psest_0527 at 580.639 kb on - strand, within Psest_0527 at 580.723 kb on - strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.762 kb on + strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.763 kb on - strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.836 kb on + strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.837 kb on - strand, within Psest_0527 at 580.902 kb on - strand, within Psest_0527 at 580.902 kb on - strand, within Psest_0527 at 581.082 kb on + strand at 581.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 3 mM remove 579,681 - -0.6 579,681 - -0.9 579,681 - +0.2 579,681 - -1.4 579,681 - +0.0 579,681 - +1.2 579,681 - -1.0 579,681 - -0.9 579,681 - -0.8 579,681 - -1.8 579,681 - +0.5 579,681 - -1.1 579,772 + +1.0 579,773 - +0.8 579,773 - +2.4 579,849 + -0.8 579,849 + -0.4 579,849 + -0.1 579,849 + -0.2 579,978 + Psest_0526 0.37 -0.3 579,979 - Psest_0526 0.37 -0.8 580,244 + +0.7 580,244 + -1.0 580,245 - +1.6 580,245 - +1.2 580,245 - -0.4 580,341 + -0.0 580,342 - -2.2 580,492 + Psest_0527 0.21 +0.2 580,493 - Psest_0527 0.21 -1.8 580,493 - Psest_0527 0.21 +0.4 580,493 - Psest_0527 0.21 -0.1 580,638 + Psest_0527 0.40 -0.6 580,638 + Psest_0527 0.40 +0.8 580,639 - Psest_0527 0.40 -0.8 580,723 - Psest_0527 0.51 -1.6 580,762 + Psest_0527 0.56 +0.4 580,762 + Psest_0527 0.56 -0.3 580,762 + Psest_0527 0.56 +0.3 580,762 + Psest_0527 0.56 -0.1 580,763 - Psest_0527 0.56 +1.2 580,763 - Psest_0527 0.56 +0.7 580,763 - Psest_0527 0.56 +0.1 580,763 - Psest_0527 0.56 -2.5 580,836 + Psest_0527 0.66 +0.5 580,836 + Psest_0527 0.66 +0.7 580,836 + Psest_0527 0.66 -1.1 580,836 + Psest_0527 0.66 +0.5 580,836 + Psest_0527 0.66 +1.6 580,836 + Psest_0527 0.66 +0.5 580,836 + Psest_0527 0.66 -0.6 580,836 + Psest_0527 0.66 -0.5 580,836 + Psest_0527 0.66 -1.1 580,837 - Psest_0527 0.66 -2.9 580,837 - Psest_0527 0.66 +0.1 580,837 - Psest_0527 0.66 +1.9 580,837 - Psest_0527 0.66 -1.2 580,837 - Psest_0527 0.66 +1.5 580,837 - Psest_0527 0.66 +0.2 580,902 - Psest_0527 0.74 +1.3 580,902 - Psest_0527 0.74 -1.7 581,082 + -1.0 581,083 - -1.3
Or see this region's nucleotide sequence