Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3882

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
4,051,547	+		Psest_3880	0.54	+0.8
4,051,547	+		Psest_3880	0.54	-0.5
4,051,547	+		Psest_3880	0.54	+0.8
4,051,548	-		Psest_3880	0.54	-0.4
4,051,548	-		Psest_3880	0.54	+0.8
4,051,548	-		Psest_3880	0.54	+0.8
4,051,548	-		Psest_3880	0.54	-0.4
4,051,548	-		Psest_3880	0.54	-1.7
4,051,548	-		Psest_3880	0.54	+1.7
4,051,572	+		Psest_3880	0.57	-0.2
4,051,572	+		Psest_3880	0.57	-0.3
4,051,572	+		Psest_3880	0.57	-0.5
4,051,572	+		Psest_3880	0.57	+0.5
4,051,572	+		Psest_3880	0.57	+1.2
4,051,573	-		Psest_3880	0.57	-1.4
4,051,573	-		Psest_3880	0.57	-0.7
4,051,573	-		Psest_3880	0.57	-0.1
4,051,603	-		Psest_3880	0.60	+0.6
4,051,603	-		Psest_3880	0.60	+1.4
4,051,603	-		Psest_3880	0.60	-0.3
4,051,603	-		Psest_3880	0.60	-0.5
4,051,796	+		Psest_3880	0.82	-0.0
4,051,797	-		Psest_3880	0.82	-0.3
4,051,797	-		Psest_3880	0.82	+0.1
4,051,800	+		Psest_3880	0.83	+0.7
4,051,800	+		Psest_3880	0.83	+0.8
4,051,800	+		Psest_3880	0.83	+1.5
4,051,800	+		Psest_3880	0.83	-0.9
4,051,800	+		Psest_3880	0.83	+2.5
4,051,801	-		Psest_3880	0.83	+1.2
4,051,801	-		Psest_3880	0.83	+1.5
4,051,801	-		Psest_3880	0.83	-0.5
4,051,801	-		Psest_3880	0.83	-0.8
4,051,801	-		Psest_3880	0.83	-0.3
4,051,801	-				+1.6
4,051,801	-		Psest_3880	0.83	+0.0
4,051,801	-		Psest_3880	0.83	-1.6
4,051,801	-		Psest_3880	0.83	-0.5
4,051,878	+				+1.2
4,051,878	+				+1.8
4,051,951	-				-1.0
4,052,063	-		Psest_3881	0.16	-0.5
4,052,501	-				-1.4
4,052,540	-				-0.7
4,052,759	+		Psest_3882	0.38	-2.7
4,052,759	+		Psest_3882	0.38	-3.2
4,052,759	+		Psest_3882	0.38	-0.2
4,052,759	+		Psest_3882	0.38	-0.3
4,052,759	+		Psest_3882	0.38	-0.1
4,052,759	+		Psest_3882	0.38	-2.3
4,052,759	+		Psest_3882	0.38	-0.7
4,052,759	+		Psest_3882	0.38	-0.1
4,052,759	+		Psest_3882	0.38	-0.9
4,052,759	+		Psest_3882	0.38	+1.5
4,052,759	+		Psest_3882	0.38	-1.0
4,052,759	+		Psest_3882	0.38	-1.3
4,052,759	+		Psest_3882	0.38	-1.6
4,052,759	+		Psest_3882	0.38	-1.3
4,052,759	+		Psest_3882	0.38	-0.2
4,052,759	+		Psest_3882	0.38	-1.5
4,052,759	+		Psest_3882	0.38	-0.6
4,052,760	-		Psest_3882	0.38	-0.1
4,052,760	-		Psest_3882	0.38	-1.1
4,052,760	-		Psest_3882	0.38	-2.3
4,052,760	-		Psest_3882	0.38	-0.3
4,052,760	-		Psest_3882	0.38	-0.2
4,052,768	+		Psest_3882	0.40	-0.2
4,052,768	+		Psest_3882	0.40	-0.4
4,052,768	+		Psest_3882	0.40	-1.3
4,052,769	-		Psest_3882	0.40	-2.2
4,052,769	-		Psest_3882	0.40	-0.7
4,052,769	-		Psest_3882	0.40	-1.7
4,052,769	-		Psest_3882	0.40	-0.4
4,052,769	-		Psest_3882	0.40	-0.0
4,052,834	+		Psest_3882	0.50	-0.6
4,052,834	+		Psest_3882	0.50	-0.8
4,052,835	-		Psest_3882	0.51	-0.2
4,052,835	-		Psest_3882	0.51	-0.1
4,052,835	-		Psest_3882	0.51	-1.4
4,052,835	-		Psest_3882	0.51	-0.4
4,052,925	-		Psest_3882	0.66	-0.3
4,052,925	-		Psest_3882	0.66	-0.4
4,053,087	+				-1.2
4,053,088	-				-1.1
4,053,088	-				-0.4
4,053,088	-				-1.2
4,053,108	-				-2.6
4,053,108	-				-1.5
4,053,108	-				-0.4
4,053,108	-				-1.4
4,053,108	-				+0.2
4,053,122	+				-2.5
4,053,122	+				-0.4
4,053,123	-				+1.5
4,053,123	-				-0.9
4,053,140	+				-0.9
4,053,140	+				+0.3
4,053,141	-				-1.2
4,053,141	-				-0.5
4,053,141	-				-2.0
4,053,372	-		Psest_3883	0.25	-0.7
4,053,431	+		Psest_3883	0.33	-0.4
4,053,495	+		Psest_3883	0.43	-1.5
4,053,495	+		Psest_3883	0.43	+0.2
4,053,495	+		Psest_3883	0.43	-0.8
4,053,495	+		Psest_3883	0.43	-1.3
4,053,495	+		Psest_3883	0.43	-1.6
4,053,495	+		Psest_3883	0.43	-1.4
4,053,496	-		Psest_3883	0.43	-2.2
4,053,496	-		Psest_3883	0.43	-1.8
4,053,496	-		Psest_3883	0.43	-2.5
4,053,496	-		Psest_3883	0.43	-0.6
4,053,496	-		Psest_3883	0.43	-0.7
4,053,661	-		Psest_3883	0.67	-2.1
4,053,666	+		Psest_3883	0.68	-0.1
4,053,681	+		Psest_3883	0.70	+0.7
4,053,739	-		Psest_3883	0.79	-0.4
4,053,739	-		Psest_3883	0.79	-0.4
4,053,739	-		Psest_3883	0.79	+0.3
4,053,855	+				-1.3