Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3855

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
4,026,145	+		Psest_3853	0.75	+0.9
4,026,145	+		Psest_3853	0.75	-1.3
4,026,145	+		Psest_3853	0.75	-0.8
4,026,146	-		Psest_3853	0.76	-0.8
4,026,146	-		Psest_3853	0.76	+1.2
4,026,318	+				-1.3
4,026,318	+				+0.3
4,026,318	+				-1.5
4,026,318	+				-0.1
4,026,319	-				-1.7
4,026,319	-				+0.8
4,026,319	-				+1.1
4,026,319	-				+1.4
4,026,319	-				-0.4
4,026,319	-				-1.2
4,026,376	+				-2.3
4,026,583	+		Psest_3854	0.35	-1.3
4,026,584	-		Psest_3854	0.35	-2.1
4,026,685	+		Psest_3854	0.50	-0.0
4,026,685	+		Psest_3854	0.50	+0.6
4,026,685	+		Psest_3854	0.50	-0.1
4,026,685	+		Psest_3854	0.50	-0.6
4,026,685	+		Psest_3854	0.50	-0.1
4,026,685	+		Psest_3854	0.50	-3.6
4,026,686	-		Psest_3854	0.50	-1.2
4,026,686	-		Psest_3854	0.50	+0.9
4,026,686	-		Psest_3854	0.50	-1.4
4,026,686	-		Psest_3854	0.50	+0.7
4,026,686	-		Psest_3854	0.50	-1.7
4,026,686	-		Psest_3854	0.50	+0.4
4,026,946	+		Psest_3854	0.87	-1.1
4,026,946	+		Psest_3854	0.87	-2.1
4,026,946	+		Psest_3854	0.87	-2.4
4,026,946	+		Psest_3854	0.87	-0.1
4,026,946	+		Psest_3854	0.87	-0.1
4,026,947	-		Psest_3854	0.87	-0.8
4,026,947	-		Psest_3854	0.87	+0.7
4,026,947	-		Psest_3854	0.87	-0.4
4,027,113	+				+1.4
4,027,113	+				-1.8
4,027,113	+				+1.0
4,027,114	-				-0.2
4,027,188	+		Psest_3855	0.17	+0.2
4,027,189	-		Psest_3855	0.17	+0.6
4,027,189	-		Psest_3855	0.17	+0.3
4,027,189	-		Psest_3855	0.17	+1.3
4,027,189	-		Psest_3855	0.17	+0.5
4,027,189	-		Psest_3855	0.17	-0.2
4,027,189	-		Psest_3855	0.17	+2.7
4,027,323	+		Psest_3855	0.32	+1.2
4,027,323	+		Psest_3855	0.32	-0.1
4,027,323	+		Psest_3855	0.32	+0.1
4,027,323	+		Psest_3855	0.32	-2.5
4,027,323	+		Psest_3855	0.32	+1.1
4,027,324	-		Psest_3855	0.32	+3.7
4,027,324	-		Psest_3855	0.32	+0.9
4,027,341	+		Psest_3855	0.34	+0.3
4,027,341	+		Psest_3855	0.34	-1.4
4,027,342	-		Psest_3855	0.34	+0.3
4,027,401	+		Psest_3855	0.41	-0.7
4,027,482	+		Psest_3855	0.50	+0.2
4,027,482	+		Psest_3855	0.50	+0.0
4,027,483	-		Psest_3855	0.50	+1.3
4,027,564	-		Psest_3855	0.59	-1.0
4,027,642	-		Psest_3855	0.68	-2.4
4,027,695	+		Psest_3855	0.74	-0.6
4,027,750	+		Psest_3855	0.80	+0.3
4,027,797	+		Psest_3855	0.85	+0.6
4,028,030	+		Psest_3856	0.11	+0.6
4,028,030	+		Psest_3856	0.11	-3.2
4,028,031	-		Psest_3856	0.11	+0.9
4,028,106	-		Psest_3856	0.18	-0.2
4,028,156	+		Psest_3856	0.23	-0.5
4,028,157	-		Psest_3856	0.24	-0.4
4,028,283	-		Psest_3856	0.36	-0.8
4,028,423	+		Psest_3856	0.50	+0.6
4,028,423	+		Psest_3856	0.50	+0.7
4,028,423	+		Psest_3856	0.50	-0.6
4,028,423	+		Psest_3856	0.50	-0.5
4,028,423	+		Psest_3856	0.50	-0.6
4,028,423	+		Psest_3856	0.50	+1.5
4,028,423	+		Psest_3856	0.50	-0.2
4,028,423	+		Psest_3856	0.50	-0.1
4,028,423	+		Psest_3856	0.50	+0.2
4,028,423	+		Psest_3856	0.50	+0.8
4,028,423	+		Psest_3856	0.50	-0.2
4,028,423	+		Psest_3856	0.50	-2.0
4,028,423	+		Psest_3856	0.50	-2.0
4,028,424	-		Psest_3856	0.51	-0.6
4,028,424	-		Psest_3856	0.51	+1.1
4,028,424	-		Psest_3856	0.51	+1.1
4,028,424	-		Psest_3856	0.51	-0.1
4,028,424	-		Psest_3856	0.51	-1.6
4,028,424	-		Psest_3856	0.51	-0.7
4,028,424	-		Psest_3856	0.51	+1.0
4,028,424	-		Psest_3856	0.51	+2.3
4,028,424	-		Psest_3856	0.51	+1.8
4,028,424	-		Psest_3856	0.51	+0.9
4,028,424	-		Psest_3856	0.51	-0.7
4,028,424	-		Psest_3856	0.51	-1.8
4,028,424	-		Psest_3856	0.51	-1.6
4,028,424	-		Psest_3856	0.51	-0.9
4,028,424	-		Psest_3856	0.51	+1.9
4,028,424	-		Psest_3856	0.51	+0.9
4,028,424	-		Psest_3856	0.51	-1.6
4,028,424	-		Psest_3856	0.51	-1.4
4,028,424	-		Psest_3856	0.51	+0.4
4,028,429	+		Psest_3856	0.51	-0.7
4,028,429	+		Psest_3856	0.51	+0.3
4,028,429	+		Psest_3856	0.51	-0.4
4,028,429	+		Psest_3856	0.51	+0.8
4,028,429	+		Psest_3856	0.51	+1.2
4,028,429	+		Psest_3856	0.51	-0.3
4,028,429	+		Psest_3856	0.51	+0.2
4,028,429	+		Psest_3856	0.51	+0.3
4,028,429	+		Psest_3856	0.51	+1.8
4,028,429	+		Psest_3856	0.51	-0.8
4,028,429	+		Psest_3856	0.51	+0.7
4,028,429	+		Psest_3856	0.51	+0.4
4,028,429	+		Psest_3856	0.51	+0.7
4,028,429	+		Psest_3856	0.51	+0.6
4,028,430	-		Psest_3856	0.51	+0.7
4,028,430	-		Psest_3856	0.51	-0.1
4,028,430	-		Psest_3856	0.51	+1.4
4,028,430	-		Psest_3856	0.51	+0.6
4,028,430	-		Psest_3856	0.51	+1.3
4,028,430	-		Psest_3856	0.51	+0.7
4,028,430	-		Psest_3856	0.51	-2.4
4,028,430	-		Psest_3856	0.51	+1.6
4,028,430	-		Psest_3856	0.51	-0.3
4,028,439	+		Psest_3856	0.52	-0.5
4,028,439	+		Psest_3856	0.52	-0.5
4,028,439	+		Psest_3856	0.52	-0.0
4,028,568	-		Psest_3856	0.65	+1.7
4,028,768	+		Psest_3856	0.85	-0.1
4,028,768	+		Psest_3856	0.85	+2.4
4,028,768	+		Psest_3856	0.85	+1.2
4,028,768	+		Psest_3856	0.85	+0.4
4,028,769	-		Psest_3856	0.86	-0.3
4,028,769	-		Psest_3856	0.86	+0.6
4,028,769	-		Psest_3856	0.86	-2.4
4,028,769	-		Psest_3856	0.86	-0.3
4,028,864	+				+0.9
4,028,864	+				-0.8
4,028,864	+				+1.0
4,028,865	-				-0.1
4,028,865	-				+1.2
4,028,865	-				+0.9
4,028,865	-				-0.4
4,028,865	-				-1.1
4,028,865	-				+1.8
4,028,865	-				+0.9