Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2129

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
2,260,207	-		Psest_2128	0.35	-1.3
2,260,669	+		Psest_2128	0.73	-1.9
2,260,670	-		Psest_2128	0.73	+0.5
2,260,670	-		Psest_2128	0.73	+0.9
2,260,729	+		Psest_2128	0.78	+0.8
2,260,729	+		Psest_2128	0.78	-0.6
2,260,729	+		Psest_2128	0.78	-0.5
2,260,966	+				-1.4
2,260,966	+				-2.2
2,260,966	+				+0.4
2,260,966	+				-0.6
2,260,967	-				+1.5
2,260,967	-				+1.5
2,260,967	-				-0.8
2,260,967	-				+0.1
2,261,070	+				+0.4
2,261,422	-		Psest_2129	0.26	+0.6
2,261,535	+		Psest_2129	0.35	-0.4
2,261,535	+		Psest_2129	0.35	-1.0
2,261,535	+		Psest_2129	0.35	+0.9
2,261,535	+		Psest_2129	0.35	-1.0
2,261,536	-		Psest_2129	0.35	+1.3
2,261,536	-		Psest_2129	0.35	-0.6
2,261,536	-		Psest_2129	0.35	-1.6
2,261,536	-		Psest_2129	0.35	-0.7
2,261,536	-		Psest_2129	0.35	+0.1
2,261,574	+		Psest_2129	0.37	+0.9
2,261,574	+		Psest_2129	0.37	+1.0
2,261,574	+		Psest_2129	0.37	+0.7
2,261,574	+		Psest_2129	0.37	+0.6
2,261,826	+		Psest_2129	0.56	-0.1
2,261,826	+		Psest_2129	0.56	+0.7
2,261,826	+		Psest_2129	0.56	-0.5
2,261,826	+		Psest_2129	0.56	+1.6
2,261,826	+		Psest_2129	0.56	+0.2
2,261,827	-		Psest_2129	0.56	+1.4
2,261,827	-		Psest_2129	0.56	+1.5
2,261,827	-		Psest_2129	0.56	+0.6
2,261,827	-		Psest_2129	0.56	-0.1
2,261,827	-		Psest_2129	0.56	+1.6
2,261,827	-		Psest_2129	0.56	-2.2
2,261,827	-		Psest_2129	0.56	+1.2
2,261,827	-		Psest_2129	0.56	+1.3
2,261,827	-		Psest_2129	0.56	-1.7
2,261,827	-		Psest_2129	0.56	+2.1
2,262,150	+		Psest_2129	0.80	+2.9
2,262,151	-		Psest_2129	0.80	-0.2
2,262,440	+				-1.1
2,262,440	+				+0.3
2,262,440	+				-1.3
2,262,441	-				-2.5
2,262,441	-				-0.5
2,262,441	-				+0.5
2,262,441	-				-0.5
2,262,457	-				-1.4
2,262,501	+				-0.5
2,262,502	-				+0.9
2,262,634	+		Psest_2130	0.14	+0.5
2,262,635	-		Psest_2130	0.14	-0.2
2,262,635	-		Psest_2130	0.14	+0.8
2,262,943	+		Psest_2130	0.52	-0.2
2,262,944	-		Psest_2130	0.52	-1.5
2,263,145	-		Psest_2130	0.77	+1.6
2,263,165	+		Psest_2130	0.79	-1.5
2,263,350	+				-0.9