Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1856

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,959,455	+				-1.5
1,959,497	+				+0.0
1,959,707	-		Psest_1855	0.27	+0.1
1,959,758	+		Psest_1855	0.32	-0.8
1,959,862	+		Psest_1855	0.43	+0.8
1,959,862	+		Psest_1855	0.43	-1.5
1,959,862	+		Psest_1855	0.43	-1.7
1,959,862	+		Psest_1855	0.43	+0.2
1,959,863	-		Psest_1855	0.43	+0.8
1,959,863	-		Psest_1855	0.43	+2.0
1,959,865	+		Psest_1855	0.43	+0.4
1,959,865	+		Psest_1855	0.43	-2.2
1,959,865	+		Psest_1855	0.43	-0.3
1,959,865	+		Psest_1855	0.43	-3.1
1,959,865	+		Psest_1855	0.43	+0.1
1,959,865	+		Psest_1855	0.43	-0.8
1,959,865	+		Psest_1855	0.43	+0.1
1,959,865	+		Psest_1855	0.43	+0.6
1,959,865	+		Psest_1855	0.43	+0.9
1,959,866	-		Psest_1855	0.43	+0.4
1,959,866	-		Psest_1855	0.43	+1.2
1,959,866	-		Psest_1855	0.43	+0.7
1,959,866	-		Psest_1855	0.43	+0.5
1,959,866	-		Psest_1855	0.43	+0.9
1,959,866	-		Psest_1855	0.43	-0.1
1,959,866	-		Psest_1855	0.43	-1.3
1,960,012	+		Psest_1855	0.58	-0.9
1,960,012	+		Psest_1855	0.58	-1.0
1,960,014	+		Psest_1855	0.58	+0.3
1,960,015	-		Psest_1855	0.58	-0.2
1,960,015	-		Psest_1855	0.58	-0.9
1,960,364	-				-0.1
1,960,417	+				-0.4
1,960,418	-				-0.6
1,960,418	-				-3.0
1,960,418	-				-0.6
1,960,538	+				-0.1
1,960,539	-				+1.5
1,960,539	-				+0.9
1,960,571	-		Psest_1856	0.13	-1.7
1,960,656	-		Psest_1856	0.22	-0.3
1,960,656	-		Psest_1856	0.22	-1.8
1,960,664	+		Psest_1856	0.23	-1.8
1,960,665	-		Psest_1856	0.23	+0.6
1,960,665	-		Psest_1856	0.23	-1.5
1,960,665	-		Psest_1856	0.23	-1.3
1,961,115	-		Psest_1856	0.70	-0.6
1,961,449	-				-0.6
1,961,649	+				-0.0
1,961,748	+		Psest_1857	0.15	-0.5
1,961,748	+		Psest_1857	0.15	+1.3
1,961,748	+		Psest_1857	0.15	-0.4
1,961,917	-		Psest_1857	0.25	-0.7
1,961,917	-		Psest_1857	0.25	+0.7
1,961,917	-		Psest_1857	0.25	-0.2
1,962,118	-		Psest_1857	0.37	-0.9
1,962,261	+		Psest_1857	0.45	+0.3
1,962,261	+		Psest_1857	0.45	+1.5
1,962,261	+		Psest_1857	0.45	-1.1
1,962,261	+		Psest_1857	0.45	-0.4
1,962,262	-		Psest_1857	0.45	+1.0
1,962,262	-		Psest_1857	0.45	-0.6
1,962,262	-		Psest_1857	0.45	-1.6
1,962,262	-		Psest_1857	0.45	+1.1
1,962,262	-		Psest_1857	0.45	+0.6
1,962,345	+		Psest_1857	0.50	+0.9
1,962,345	+		Psest_1857	0.50	-1.5
1,962,345	+		Psest_1857	0.50	-0.3
1,962,345	+		Psest_1857	0.50	-0.1
1,962,346	-		Psest_1857	0.50	-0.6
1,962,346	-		Psest_1857	0.50	-0.5
1,962,347	+		Psest_1857	0.50	-0.8
1,962,348	-		Psest_1857	0.50	+0.0
1,962,348	-		Psest_1857	0.50	+0.1
1,962,348	-		Psest_1857	0.50	-0.8
1,962,348	-		Psest_1857	0.50	-1.6
1,962,354	-		Psest_1857	0.50	-1.6
1,962,355	+		Psest_1857	0.50	-0.0
1,962,355	+		Psest_1857	0.50	+0.8
1,962,355	+		Psest_1857	0.50	+0.7
1,962,356	-		Psest_1857	0.50	+1.8
1,962,356	-		Psest_1857	0.50	+1.2
1,962,363	+		Psest_1857	0.51	+1.3
1,962,363	+		Psest_1857	0.51	-1.2
1,962,363	+		Psest_1857	0.51	-1.6
1,962,364	-		Psest_1857	0.51	+1.5
1,962,364	-		Psest_1857	0.51	+1.2
1,962,364	-		Psest_1857	0.51	-1.0
1,962,387	+		Psest_1857	0.52	-3.0
1,962,388	-		Psest_1857	0.52	-0.4