Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0161
Experiment: syringaldehyde 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 3 mM |
---|---|---|---|---|---|
remove | |||||
159,184 | + | +0.6 | |||
159,307 | - | -0.2 | |||
159,342 | - | -1.8 | |||
159,412 | - | Psest_0161 | 0.13 | -0.3 | |
159,482 | + | Psest_0161 | 0.19 | +0.2 | |
159,482 | + | Psest_0161 | 0.19 | -1.7 | |
159,483 | - | Psest_0161 | 0.19 | -0.6 | |
159,540 | - | Psest_0161 | 0.24 | +1.8 | |
160,086 | + | Psest_0161 | 0.67 | +0.7 | |
160,527 | - | +0.7 | |||
160,537 | + | -2.2 | |||
160,538 | - | +2.6 | |||
160,538 | - | +2.5 | |||
160,538 | - | +0.2 | |||
160,538 | - | -1.4 | |||
160,538 | - | +0.7 | |||
160,538 | - | +0.2 | |||
160,538 | - | +2.1 | |||
160,538 | - | -0.9 | |||
160,538 | - | +1.3 | |||
160,538 | - | -0.5 | |||
160,538 | - | -0.0 | |||
160,538 | - | -0.5 | |||
160,538 | - | -1.5 | |||
160,538 | - | +2.2 | |||
160,538 | - | +0.0 | |||
160,538 | - | -0.6 | |||
160,541 | - | -2.6 | |||
160,541 | - | +0.0 | |||
160,541 | - | -0.9 | |||
160,541 | - | +0.8 | |||
160,541 | - | -1.1 | |||
160,541 | - | -0.1 | |||
160,541 | - | +1.7 | |||
160,541 | - | -2.0 | |||
160,541 | - | -1.5 | |||
160,547 | - | +1.8 |
Or see this region's nucleotide sequence