Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3528 and Psest_3529 are separated by 49 nucleotides Psest_3529 and Psest_3530 are separated by 2 nucleotides Psest_3530 and Psest_3531 are separated by 170 nucleotides Psest_3531 and Psest_3532 are separated by 8 nucleotides Psest_3532 and Psest_3533 overlap by 1 nucleotides
Psest_3528: Psest_3528 - Predicted membrane protein, at 3,709,436 to 3,709,876
_3528
Psest_3529: Psest_3529 - Uncharacterized protein conserved in bacteria, at 3,709,926 to 3,710,699
_3529
Psest_3530: Psest_3530 - Copper binding periplasmic protein CusF., at 3,710,702 to 3,711,058
_3530
Psest_3531: Psest_3531 - Peptidase propeptide and YPEB domain., at 3,711,229 to 3,711,537
_3531
Psest_3532: Psest_3532 - Peptidase propeptide and YPEB domain., at 3,711,546 to 3,711,851
_3532
Psest_3533: Psest_3533 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,711,851 to 3,712,516
_3533
Position (kb)
3710
3711
3712 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3709.737 kb on + strand, within Psest_3528 at 3709.737 kb on + strand, within Psest_3528 at 3709.737 kb on + strand, within Psest_3528 at 3709.738 kb on - strand, within Psest_3528 at 3709.738 kb on - strand, within Psest_3528 at 3709.744 kb on - strand, within Psest_3528 at 3709.761 kb on - strand, within Psest_3528 at 3709.761 kb on - strand, within Psest_3528 at 3710.070 kb on + strand, within Psest_3529 at 3710.070 kb on + strand, within Psest_3529 at 3710.071 kb on - strand, within Psest_3529 at 3710.071 kb on - strand, within Psest_3529 at 3710.259 kb on - strand, within Psest_3529 at 3710.406 kb on + strand, within Psest_3529 at 3710.406 kb on + strand, within Psest_3529 at 3710.407 kb on - strand, within Psest_3529 at 3710.407 kb on - strand, within Psest_3529 at 3710.407 kb on - strand, within Psest_3529 at 3710.407 kb on - strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.527 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.538 kb on + strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.539 kb on - strand, within Psest_3529 at 3710.703 kb on + strand at 3711.097 kb on - strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.102 kb on + strand at 3711.103 kb on - strand at 3711.103 kb on - strand at 3711.103 kb on - strand at 3711.105 kb on + strand at 3711.106 kb on - strand at 3711.106 kb on - strand at 3711.106 kb on - strand at 3711.106 kb on - strand at 3711.163 kb on + strand at 3711.164 kb on - strand at 3711.164 kb on - strand at 3711.243 kb on + strand at 3711.243 kb on + strand at 3711.243 kb on + strand at 3711.244 kb on - strand at 3711.442 kb on + strand, within Psest_3531 at 3711.442 kb on + strand, within Psest_3531 at 3711.442 kb on + strand, within Psest_3531 at 3711.750 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.754 kb on - strand, within Psest_3532 at 3711.962 kb on + strand, within Psest_3533 at 3711.984 kb on - strand, within Psest_3533
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.3 vol% remove 3,709,737 + Psest_3528 0.68 +0.8 3,709,737 + Psest_3528 0.68 -1.7 3,709,737 + Psest_3528 0.68 +2.1 3,709,738 - Psest_3528 0.68 +0.5 3,709,738 - Psest_3528 0.68 -0.8 3,709,744 - Psest_3528 0.70 -2.5 3,709,761 - Psest_3528 0.74 -1.0 3,709,761 - Psest_3528 0.74 -1.7 3,710,070 + Psest_3529 0.19 +0.2 3,710,070 + Psest_3529 0.19 -1.6 3,710,071 - Psest_3529 0.19 +1.1 3,710,071 - Psest_3529 0.19 -0.5 3,710,259 - Psest_3529 0.43 +0.3 3,710,406 + Psest_3529 0.62 -0.9 3,710,406 + Psest_3529 0.62 +0.9 3,710,407 - Psest_3529 0.62 +0.4 3,710,407 - Psest_3529 0.62 +0.1 3,710,407 - Psest_3529 0.62 -1.1 3,710,407 - Psest_3529 0.62 -0.8 3,710,527 + Psest_3529 0.78 -1.1 3,710,527 + Psest_3529 0.78 -0.1 3,710,527 + Psest_3529 0.78 +1.5 3,710,527 + Psest_3529 0.78 -0.3 3,710,527 + Psest_3529 0.78 +1.1 3,710,527 + Psest_3529 0.78 +0.6 3,710,538 + Psest_3529 0.79 -1.7 3,710,538 + Psest_3529 0.79 -0.5 3,710,538 + Psest_3529 0.79 +1.0 3,710,538 + Psest_3529 0.79 +1.5 3,710,538 + Psest_3529 0.79 +1.2 3,710,538 + Psest_3529 0.79 +1.3 3,710,538 + Psest_3529 0.79 +1.5 3,710,538 + Psest_3529 0.79 -0.8 3,710,538 + Psest_3529 0.79 +0.6 3,710,538 + Psest_3529 0.79 -1.0 3,710,538 + Psest_3529 0.79 -0.8 3,710,538 + Psest_3529 0.79 -0.8 3,710,539 - Psest_3529 0.79 +0.6 3,710,539 - Psest_3529 0.79 -0.3 3,710,539 - Psest_3529 0.79 +2.3 3,710,539 - Psest_3529 0.79 -0.8 3,710,539 - Psest_3529 0.79 +0.2 3,710,539 - Psest_3529 0.79 -0.3 3,710,539 - Psest_3529 0.79 +0.4 3,710,539 - Psest_3529 0.79 +1.2 3,710,539 - Psest_3529 0.79 -0.6 3,710,539 - Psest_3529 0.79 +0.5 3,710,539 - Psest_3529 0.79 +0.4 3,710,539 - Psest_3529 0.79 -1.0 3,710,539 - Psest_3529 0.79 +0.4 3,710,703 + +1.7 3,711,097 - +0.8 3,711,102 + -0.9 3,711,102 + -1.0 3,711,102 + +1.8 3,711,102 + +1.3 3,711,102 + +0.1 3,711,102 + +1.4 3,711,102 + +1.2 3,711,103 - -0.7 3,711,103 - -0.4 3,711,103 - +1.1 3,711,105 + -0.5 3,711,106 - +1.1 3,711,106 - -0.5 3,711,106 - -0.9 3,711,106 - +0.6 3,711,163 + +0.7 3,711,164 - -0.8 3,711,164 - +1.6 3,711,243 + -0.1 3,711,243 + -0.7 3,711,243 + +2.0 3,711,244 - +2.2 3,711,442 + Psest_3531 0.69 -1.7 3,711,442 + Psest_3531 0.69 -0.9 3,711,442 + Psest_3531 0.69 -1.6 3,711,750 - Psest_3532 0.67 +0.4 3,711,754 - Psest_3532 0.68 -0.8 3,711,754 - Psest_3532 0.68 -1.7 3,711,754 - Psest_3532 0.68 -0.0 3,711,754 - Psest_3532 0.68 +1.5 3,711,754 - Psest_3532 0.68 +0.7 3,711,754 - Psest_3532 0.68 -1.2 3,711,754 - Psest_3532 0.68 +0.2 3,711,754 - Psest_3532 0.68 -0.5 3,711,754 - Psest_3532 0.68 -0.3 3,711,754 - Psest_3532 0.68 -0.2 3,711,754 - Psest_3532 0.68 -0.3 3,711,754 - Psest_3532 0.68 -0.5 3,711,754 - Psest_3532 0.68 -0.4 3,711,754 - Psest_3532 0.68 +1.0 3,711,754 - Psest_3532 0.68 -2.4 3,711,754 - Psest_3532 0.68 +0.9 3,711,754 - Psest_3532 0.68 +0.6 3,711,754 - Psest_3532 0.68 +1.5 3,711,754 - Psest_3532 0.68 -0.5 3,711,754 - Psest_3532 0.68 +0.5 3,711,754 - Psest_3532 0.68 -0.3 3,711,962 + Psest_3533 0.17 +0.5 3,711,984 - Psest_3533 0.20 +1.5
Or see this region's nucleotide sequence