Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3088
Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.3 vol% |
---|---|---|---|---|---|
remove | |||||
3,267,280 | + | +1.0 | |||
3,267,280 | + | -1.8 | |||
3,267,280 | + | -0.7 | |||
3,267,281 | - | -0.7 | |||
3,267,437 | + | Psest_3087 | 0.13 | -0.3 | |
3,267,437 | + | Psest_3087 | 0.13 | +1.1 | |
3,267,532 | + | Psest_3087 | 0.22 | +1.0 | |
3,267,661 | + | Psest_3087 | 0.36 | -1.6 | |
3,267,667 | + | Psest_3087 | 0.37 | +0.0 | |
3,267,837 | + | Psest_3087 | 0.54 | +0.0 | |
3,267,837 | + | Psest_3087 | 0.54 | +0.5 | |
3,267,838 | - | Psest_3087 | 0.54 | +1.3 | |
3,267,841 | + | Psest_3087 | 0.55 | -0.8 | |
3,267,841 | + | Psest_3087 | 0.55 | -0.2 | |
3,267,841 | + | Psest_3087 | 0.55 | +0.7 | |
3,267,983 | - | Psest_3087 | 0.70 | +0.0 | |
3,268,038 | + | Psest_3087 | 0.75 | -0.1 | |
3,268,293 | - | Psest_3088 | 0.17 | -1.2 | |
3,268,318 | + | Psest_3088 | 0.29 | +0.2 | |
3,268,319 | - | Psest_3088 | 0.29 | -0.3 | |
3,268,319 | - | Psest_3088 | 0.29 | -1.5 | |
3,268,319 | - | Psest_3088 | 0.29 | -2.8 | |
3,268,319 | - | Psest_3088 | 0.29 | -0.5 | |
3,268,475 | - | -1.1 | |||
3,268,564 | - | -0.9 |
Or see this region's nucleotide sequence