Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3074 and Psest_3075 are separated by 102 nucleotides Psest_3075 and Psest_3076 are separated by 209 nucleotides
Psest_3074: Psest_3074 - Domain of Unknown Function (DUF1206)., at 3,250,322 to 3,251,137
_3074
Psest_3075: Psest_3075 - sodium/proline symporter, at 3,251,240 to 3,252,724
_3075
Psest_3076: Psest_3076 - Outer membrane receptor proteins, mostly Fe transport, at 3,252,934 to 3,254,949
_3076
Position (kb)
3251
3252
3253 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3250.385 kb on + strand at 3250.385 kb on + strand at 3250.385 kb on + strand at 3250.385 kb on + strand at 3250.386 kb on - strand at 3250.386 kb on - strand at 3250.386 kb on - strand at 3250.440 kb on + strand, within Psest_3074 at 3250.440 kb on + strand, within Psest_3074 at 3250.440 kb on + strand, within Psest_3074 at 3250.441 kb on - strand, within Psest_3074 at 3250.444 kb on + strand, within Psest_3074 at 3250.444 kb on + strand, within Psest_3074 at 3250.444 kb on + strand, within Psest_3074 at 3250.594 kb on - strand, within Psest_3074 at 3250.594 kb on - strand, within Psest_3074 at 3250.599 kb on + strand, within Psest_3074 at 3250.599 kb on + strand, within Psest_3074 at 3250.600 kb on - strand, within Psest_3074 at 3250.600 kb on - strand, within Psest_3074 at 3250.603 kb on + strand, within Psest_3074 at 3250.603 kb on + strand, within Psest_3074 at 3250.603 kb on + strand, within Psest_3074 at 3250.626 kb on + strand, within Psest_3074 at 3250.626 kb on + strand, within Psest_3074 at 3250.627 kb on - strand, within Psest_3074 at 3250.787 kb on - strand, within Psest_3074 at 3250.847 kb on + strand, within Psest_3074 at 3250.847 kb on + strand, within Psest_3074 at 3250.847 kb on + strand, within Psest_3074 at 3250.848 kb on - strand, within Psest_3074 at 3250.848 kb on - strand, within Psest_3074 at 3251.040 kb on + strand, within Psest_3074 at 3251.041 kb on - strand, within Psest_3074 at 3251.081 kb on + strand at 3251.081 kb on + strand at 3251.081 kb on + strand at 3251.082 kb on - strand at 3251.165 kb on + strand at 3251.652 kb on + strand, within Psest_3075 at 3251.652 kb on + strand, within Psest_3075 at 3251.652 kb on + strand, within Psest_3075 at 3251.652 kb on + strand, within Psest_3075 at 3251.652 kb on + strand, within Psest_3075 at 3251.652 kb on + strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.653 kb on - strand, within Psest_3075 at 3251.705 kb on - strand, within Psest_3075 at 3251.841 kb on + strand, within Psest_3075 at 3251.982 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.204 kb on + strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.205 kb on - strand, within Psest_3075 at 3252.306 kb on + strand, within Psest_3075 at 3252.307 kb on - strand, within Psest_3075 at 3252.307 kb on - strand, within Psest_3075 at 3252.330 kb on - strand, within Psest_3075 at 3252.330 kb on - strand, within Psest_3075 at 3252.388 kb on - strand, within Psest_3075 at 3252.388 kb on - strand, within Psest_3075 at 3252.621 kb on + strand at 3252.621 kb on + strand at 3252.621 kb on + strand at 3252.621 kb on + strand at 3252.621 kb on + strand at 3252.622 kb on - strand at 3252.622 kb on - strand at 3252.622 kb on - strand at 3252.622 kb on - strand at 3252.640 kb on + strand at 3252.684 kb on + strand at 3252.684 kb on + strand at 3252.684 kb on + strand at 3252.684 kb on + strand at 3252.685 kb on - strand at 3252.685 kb on - strand at 3252.932 kb on + strand at 3252.933 kb on - strand at 3252.955 kb on + strand at 3252.966 kb on + strand at 3252.966 kb on + strand at 3252.966 kb on + strand at 3252.967 kb on - strand at 3253.035 kb on + strand at 3253.049 kb on + strand at 3253.049 kb on + strand at 3253.049 kb on + strand at 3253.058 kb on + strand at 3253.059 kb on - strand at 3253.085 kb on + strand at 3253.086 kb on - strand at 3253.086 kb on - strand at 3253.112 kb on + strand at 3253.113 kb on - strand at 3253.113 kb on - strand at 3253.166 kb on + strand, within Psest_3076 at 3253.166 kb on + strand, within Psest_3076 at 3253.197 kb on + strand, within Psest_3076 at 3253.198 kb on - strand, within Psest_3076 at 3253.373 kb on + strand, within Psest_3076 at 3253.424 kb on + strand, within Psest_3076 at 3253.424 kb on + strand, within Psest_3076 at 3253.424 kb on + strand, within Psest_3076 at 3253.425 kb on - strand, within Psest_3076 at 3253.425 kb on - strand, within Psest_3076 at 3253.425 kb on - strand, within Psest_3076 at 3253.425 kb on - strand, within Psest_3076 at 3253.425 kb on - strand, within Psest_3076
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.3 vol% remove 3,250,385 + +0.9 3,250,385 + -0.3 3,250,385 + -2.3 3,250,385 + +1.3 3,250,386 - +1.3 3,250,386 - +2.0 3,250,386 - +2.5 3,250,440 + Psest_3074 0.14 -0.6 3,250,440 + Psest_3074 0.14 -0.7 3,250,440 + Psest_3074 0.14 +1.3 3,250,441 - Psest_3074 0.15 -1.2 3,250,444 + Psest_3074 0.15 -0.2 3,250,444 + Psest_3074 0.15 -2.1 3,250,444 + Psest_3074 0.15 +0.5 3,250,594 - Psest_3074 0.33 +0.4 3,250,594 - Psest_3074 0.33 -1.1 3,250,599 + Psest_3074 0.34 -0.9 3,250,599 + Psest_3074 0.34 -1.0 3,250,600 - Psest_3074 0.34 +0.5 3,250,600 - Psest_3074 0.34 -0.7 3,250,603 + Psest_3074 0.34 -0.9 3,250,603 + Psest_3074 0.34 +0.7 3,250,603 + Psest_3074 0.34 -0.5 3,250,626 + Psest_3074 0.37 +0.9 3,250,626 + Psest_3074 0.37 -2.9 3,250,627 - Psest_3074 0.37 +1.0 3,250,787 - Psest_3074 0.57 +0.9 3,250,847 + Psest_3074 0.64 +0.5 3,250,847 + Psest_3074 0.64 -0.7 3,250,847 + Psest_3074 0.64 -0.9 3,250,848 - Psest_3074 0.64 +1.0 3,250,848 - Psest_3074 0.64 -0.6 3,251,040 + Psest_3074 0.88 -0.5 3,251,041 - Psest_3074 0.88 +0.5 3,251,081 + +1.6 3,251,081 + -1.3 3,251,081 + +0.2 3,251,082 - +0.6 3,251,165 + +0.2 3,251,652 + Psest_3075 0.28 +0.8 3,251,652 + Psest_3075 0.28 +0.2 3,251,652 + Psest_3075 0.28 +1.6 3,251,652 + Psest_3075 0.28 +0.1 3,251,652 + Psest_3075 0.28 +1.1 3,251,652 + Psest_3075 0.28 +0.8 3,251,653 - Psest_3075 0.28 +0.9 3,251,653 - Psest_3075 0.28 +2.5 3,251,653 - Psest_3075 0.28 +1.3 3,251,653 - Psest_3075 0.28 +0.7 3,251,653 - Psest_3075 0.28 -2.0 3,251,653 - Psest_3075 0.28 +1.7 3,251,653 - Psest_3075 0.28 -0.8 3,251,653 - Psest_3075 0.28 +2.5 3,251,653 - Psest_3075 0.28 +0.8 3,251,653 - Psest_3075 0.28 -0.7 3,251,705 - Psest_3075 0.31 -0.6 3,251,841 + Psest_3075 0.40 +1.7 3,251,982 + Psest_3075 0.50 -0.3 3,252,204 + Psest_3075 0.65 +0.6 3,252,204 + Psest_3075 0.65 +1.4 3,252,204 + Psest_3075 0.65 +0.4 3,252,204 + Psest_3075 0.65 +0.1 3,252,204 + Psest_3075 0.65 -2.0 3,252,204 + Psest_3075 0.65 +0.8 3,252,204 + Psest_3075 0.65 +0.2 3,252,205 - Psest_3075 0.65 +0.8 3,252,205 - Psest_3075 0.65 +0.2 3,252,205 - Psest_3075 0.65 +1.1 3,252,205 - Psest_3075 0.65 +1.3 3,252,205 - Psest_3075 0.65 -0.2 3,252,205 - Psest_3075 0.65 -1.0 3,252,205 - Psest_3075 0.65 +3.1 3,252,205 - Psest_3075 0.65 -0.4 3,252,205 - Psest_3075 0.65 -0.3 3,252,306 + Psest_3075 0.72 +0.9 3,252,307 - Psest_3075 0.72 -0.3 3,252,307 - Psest_3075 0.72 -1.9 3,252,330 - Psest_3075 0.73 -2.7 3,252,330 - Psest_3075 0.73 -0.4 3,252,388 - Psest_3075 0.77 +0.4 3,252,388 - Psest_3075 0.77 +0.9 3,252,621 + +0.0 3,252,621 + +0.9 3,252,621 + -0.3 3,252,621 + +1.6 3,252,621 + -0.9 3,252,622 - -0.3 3,252,622 - +0.4 3,252,622 - +3.9 3,252,622 - -0.1 3,252,640 + +0.3 3,252,684 + +1.7 3,252,684 + +0.9 3,252,684 + +0.1 3,252,684 + +0.2 3,252,685 - -0.1 3,252,685 - -0.2 3,252,932 + -1.2 3,252,933 - -0.2 3,252,955 + -0.4 3,252,966 + +0.3 3,252,966 + +0.1 3,252,966 + -0.7 3,252,967 - +0.1 3,253,035 + +2.0 3,253,049 + -0.3 3,253,049 + +1.4 3,253,049 + -1.0 3,253,058 + -0.2 3,253,059 - +0.4 3,253,085 + -1.5 3,253,086 - +0.1 3,253,086 - +0.4 3,253,112 + -0.6 3,253,113 - -0.1 3,253,113 - -0.8 3,253,166 + Psest_3076 0.12 -1.2 3,253,166 + Psest_3076 0.12 -0.8 3,253,197 + Psest_3076 0.13 -2.1 3,253,198 - Psest_3076 0.13 +2.0 3,253,373 + Psest_3076 0.22 +1.1 3,253,424 + Psest_3076 0.24 -1.0 3,253,424 + Psest_3076 0.24 -2.3 3,253,424 + Psest_3076 0.24 +1.4 3,253,425 - Psest_3076 0.24 +1.3 3,253,425 - Psest_3076 0.24 -2.9 3,253,425 - Psest_3076 0.24 -0.8 3,253,425 - Psest_3076 0.24 +1.3 3,253,425 - Psest_3076 0.24 +1.7
Or see this region's nucleotide sequence