Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2747 and Psest_2748 are separated by 69 nucleotides Psest_2748 and Psest_2749 overlap by 4 nucleotides Psest_2749 and Psest_2750 are separated by 54 nucleotides
Psest_2747: Psest_2747 - Putative NADPH-quinone reductase (modulator of drug activity B), at 2,938,324 to 2,939,106
_2747
Psest_2748: Psest_2748 - Transcriptional regulator, at 2,939,176 to 2,940,081
_2748
Psest_2749: Psest_2749 - Predicted transcriptional regulators, at 2,940,078 to 2,940,461
_2749
Psest_2750: Psest_2750 - Nucleoside-diphosphate-sugar epimerases, at 2,940,516 to 2,941,607
_2750
Position (kb)
2939
2940
2941 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.629 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2939.087 kb on + strand at 2939.088 kb on - strand at 2939.088 kb on - strand at 2939.159 kb on + strand at 2939.172 kb on + strand at 2939.354 kb on + strand, within Psest_2748 at 2939.704 kb on + strand, within Psest_2748 at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.079 kb on + strand at 2940.079 kb on + strand at 2940.080 kb on - strand at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.202 kb on + strand, within Psest_2749 at 2940.202 kb on + strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.548 kb on + strand at 2940.548 kb on + strand at 2940.549 kb on - strand at 2940.549 kb on - strand at 2940.888 kb on + strand, within Psest_2750 at 2940.889 kb on - strand, within Psest_2750 at 2940.889 kb on - strand, within Psest_2750 at 2940.978 kb on + strand, within Psest_2750 at 2940.979 kb on - strand, within Psest_2750 at 2940.981 kb on + strand, within Psest_2750 at 2940.982 kb on - strand, within Psest_2750
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.3 vol% remove 2,938,336 + -0.8 2,938,336 + -1.5 2,938,336 + -0.5 2,938,336 + -0.6 2,938,336 + +0.3 2,938,337 - +0.9 2,938,337 - +0.7 2,938,337 - +1.9 2,938,337 - -1.2 2,938,337 - +0.1 2,938,579 + Psest_2747 0.33 +0.0 2,938,579 + Psest_2747 0.33 -1.1 2,938,579 + Psest_2747 0.33 -1.0 2,938,579 + Psest_2747 0.33 -1.4 2,938,580 - Psest_2747 0.33 +0.3 2,938,580 - Psest_2747 0.33 +0.7 2,938,580 - Psest_2747 0.33 +0.7 2,938,580 - Psest_2747 0.33 +1.1 2,938,580 - Psest_2747 0.33 -1.9 2,938,629 - Psest_2747 0.39 +0.0 2,938,740 - Psest_2747 0.53 -0.4 2,938,740 - Psest_2747 0.53 -1.9 2,938,758 - Psest_2747 0.55 +1.0 2,938,758 - Psest_2747 0.55 +1.2 2,938,758 - Psest_2747 0.55 +0.2 2,938,758 - Psest_2747 0.55 +0.6 2,938,988 + Psest_2747 0.85 -0.5 2,938,988 + Psest_2747 0.85 +0.7 2,938,988 + Psest_2747 0.85 +3.1 2,938,988 + Psest_2747 0.85 +1.4 2,938,989 - Psest_2747 0.85 +0.8 2,938,989 - Psest_2747 0.85 +0.3 2,939,087 + -1.3 2,939,088 - +0.1 2,939,088 - +1.6 2,939,159 + -0.4 2,939,172 + -1.7 2,939,354 + Psest_2748 0.20 -0.6 2,939,704 + Psest_2748 0.58 -1.7 2,940,072 + +0.6 2,940,072 + +0.6 2,940,072 + -0.9 2,940,079 + +0.1 2,940,079 + +1.3 2,940,080 - +1.6 2,940,152 - Psest_2749 0.19 -0.3 2,940,152 - Psest_2749 0.19 -0.6 2,940,152 - Psest_2749 0.19 +0.7 2,940,152 - Psest_2749 0.19 +0.2 2,940,202 + Psest_2749 0.32 -0.3 2,940,202 + Psest_2749 0.32 -1.4 2,940,203 - Psest_2749 0.33 -0.9 2,940,203 - Psest_2749 0.33 -0.2 2,940,203 - Psest_2749 0.33 -2.6 2,940,203 - Psest_2749 0.33 +0.1 2,940,203 - Psest_2749 0.33 -1.6 2,940,548 + -0.9 2,940,548 + +1.6 2,940,549 - -1.6 2,940,549 - +1.0 2,940,888 + Psest_2750 0.34 -0.1 2,940,889 - Psest_2750 0.34 +0.3 2,940,889 - Psest_2750 0.34 -0.6 2,940,978 + Psest_2750 0.42 +0.9 2,940,979 - Psest_2750 0.42 -0.0 2,940,981 + Psest_2750 0.43 +1.4 2,940,982 - Psest_2750 0.43 +1.5
Or see this region's nucleotide sequence