Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0132 and Psest_0133 are separated by 26 nucleotides Psest_0133 and Psest_0134 are separated by 16 nucleotides Psest_0134 and Psest_0135 are separated by 378 nucleotides
Psest_0132: Psest_0132 - type VI secretion protein, EvpB/VC_A0108 family, at 130,780 to 132,258
_0132
Psest_0133: Psest_0133 - type VI secretion protein, VC_A0107 family, at 132,285 to 132,791
_0133
Psest_0134: Psest_0134 - type VI secretion-associated protein, VC_A0119 family, at 132,808 to 134,370
_0134
Psest_0135: Psest_0135 - Uncharacterized enzymes related to aldose 1-epimerase, at 134,749 to 135,651
_0135
Position (kb) 132
133
134
135 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 131.817 kb on - strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.828 kb on + strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.829 kb on - strand, within Psest_0132 at 131.840 kb on + strand, within Psest_0132 at 131.840 kb on + strand, within Psest_0132 at 131.840 kb on + strand, within Psest_0132 at 131.840 kb on + strand, within Psest_0132 at 131.840 kb on + strand, within Psest_0132 at 131.841 kb on - strand, within Psest_0132 at 131.841 kb on - strand, within Psest_0132 at 132.152 kb on + strand at 132.152 kb on + strand at 132.152 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.260 kb on + strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.261 kb on - strand at 132.283 kb on + strand at 132.283 kb on + strand at 132.361 kb on - strand, within Psest_0133 at 132.361 kb on - strand, within Psest_0133 at 133.016 kb on + strand, within Psest_0134 at 133.016 kb on + strand, within Psest_0134 at 133.016 kb on + strand, within Psest_0134 at 133.016 kb on + strand, within Psest_0134 at 133.017 kb on - strand, within Psest_0134 at 133.017 kb on - strand, within Psest_0134 at 133.485 kb on - strand, within Psest_0134 at 133.511 kb on + strand, within Psest_0134 at 133.943 kb on - strand, within Psest_0134 at 134.069 kb on + strand, within Psest_0134 at 134.083 kb on + strand, within Psest_0134 at 134.084 kb on - strand, within Psest_0134 at 134.084 kb on - strand, within Psest_0134 at 134.084 kb on - strand, within Psest_0134 at 134.420 kb on + strand at 134.420 kb on + strand at 134.421 kb on - strand at 134.421 kb on - strand at 134.424 kb on + strand at 134.427 kb on + strand at 134.428 kb on - strand at 134.428 kb on - strand at 134.486 kb on + strand at 134.487 kb on - strand at 134.519 kb on + strand at 134.519 kb on + strand at 134.520 kb on - strand at 134.520 kb on - strand at 134.636 kb on + strand at 134.656 kb on - strand at 134.670 kb on + strand at 134.670 kb on + strand at 134.670 kb on + strand at 134.682 kb on + strand at 134.682 kb on + strand at 134.682 kb on + strand at 134.682 kb on + strand at 134.682 kb on + strand at 134.682 kb on + strand at 134.683 kb on - strand at 134.686 kb on + strand at 134.686 kb on + strand at 134.686 kb on + strand at 134.686 kb on + strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.687 kb on - strand at 134.692 kb on + strand at 134.692 kb on + strand at 134.692 kb on + strand at 134.692 kb on + strand at 134.693 kb on - strand at 134.696 kb on + strand at 134.697 kb on - strand at 134.722 kb on - strand at 134.728 kb on - strand at 134.728 kb on - strand at 134.730 kb on - strand at 134.877 kb on - strand, within Psest_0135 at 134.920 kb on + strand, within Psest_0135 at 134.920 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.008 kb on + strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.009 kb on - strand, within Psest_0135 at 135.081 kb on + strand, within Psest_0135 at 135.089 kb on + strand, within Psest_0135 at 135.090 kb on - strand, within Psest_0135 at 135.090 kb on - strand, within Psest_0135 at 135.090 kb on - strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.146 kb on + strand, within Psest_0135 at 135.147 kb on - strand, within Psest_0135 at 135.147 kb on - strand, within Psest_0135 at 135.147 kb on - strand, within Psest_0135 at 135.147 kb on - strand, within Psest_0135 at 135.147 kb on - strand, within Psest_0135 at 135.168 kb on + strand, within Psest_0135 at 135.169 kb on - strand, within Psest_0135 at 135.361 kb on + strand, within Psest_0135 at 135.362 kb on - strand, within Psest_0135
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.3 vol% remove 131,817 - Psest_0132 0.70 -0.8 131,828 + Psest_0132 0.71 -1.1 131,828 + Psest_0132 0.71 +0.5 131,828 + Psest_0132 0.71 +1.1 131,828 + Psest_0132 0.71 +0.4 131,828 + Psest_0132 0.71 -0.6 131,828 + Psest_0132 0.71 -1.5 131,828 + Psest_0132 0.71 -0.6 131,828 + Psest_0132 0.71 -0.1 131,828 + Psest_0132 0.71 +0.9 131,828 + Psest_0132 0.71 -0.5 131,828 + Psest_0132 0.71 -0.3 131,828 + Psest_0132 0.71 -0.2 131,828 + Psest_0132 0.71 +1.0 131,828 + Psest_0132 0.71 -0.4 131,829 - Psest_0132 0.71 +0.9 131,829 - Psest_0132 0.71 +1.3 131,829 - Psest_0132 0.71 -2.1 131,829 - Psest_0132 0.71 +1.4 131,829 - Psest_0132 0.71 +0.2 131,829 - Psest_0132 0.71 +5.0 131,829 - Psest_0132 0.71 +2.2 131,829 - Psest_0132 0.71 +1.2 131,829 - Psest_0132 0.71 -0.3 131,829 - Psest_0132 0.71 -1.6 131,829 - Psest_0132 0.71 -1.8 131,829 - Psest_0132 0.71 +0.9 131,840 + Psest_0132 0.72 -1.2 131,840 + Psest_0132 0.72 -0.4 131,840 + Psest_0132 0.72 +1.5 131,840 + Psest_0132 0.72 +0.3 131,840 + Psest_0132 0.72 -1.5 131,841 - Psest_0132 0.72 +0.2 131,841 - Psest_0132 0.72 -0.4 132,152 + +0.4 132,152 + +1.7 132,152 + -0.2 132,260 + +0.1 132,260 + -0.5 132,260 + +1.9 132,260 + -0.2 132,260 + +1.1 132,260 + +0.8 132,260 + +0.8 132,260 + +0.9 132,260 + -0.6 132,260 + +0.7 132,260 + -0.1 132,260 + +2.1 132,260 + +0.4 132,260 + +0.4 132,260 + +0.2 132,260 + +1.8 132,260 + +0.5 132,260 + -0.1 132,261 - -2.4 132,261 - -0.8 132,261 - -0.4 132,261 - -0.2 132,261 - +0.5 132,261 - +0.4 132,261 - +0.4 132,261 - -1.2 132,261 - +0.5 132,261 - +1.7 132,261 - -1.6 132,261 - -1.8 132,261 - -0.6 132,261 - -0.0 132,283 + -1.9 132,283 + -0.0 132,361 - Psest_0133 0.15 -1.1 132,361 - Psest_0133 0.15 +1.0 133,016 + Psest_0134 0.13 +0.4 133,016 + Psest_0134 0.13 -0.5 133,016 + Psest_0134 0.13 -1.0 133,016 + Psest_0134 0.13 -2.9 133,017 - Psest_0134 0.13 -0.5 133,017 - Psest_0134 0.13 -0.5 133,485 - Psest_0134 0.43 -1.6 133,511 + Psest_0134 0.45 -1.4 133,943 - Psest_0134 0.73 -1.1 134,069 + Psest_0134 0.81 +0.9 134,083 + Psest_0134 0.82 -1.0 134,084 - Psest_0134 0.82 +0.8 134,084 - Psest_0134 0.82 -1.2 134,084 - Psest_0134 0.82 +0.4 134,420 + +0.1 134,420 + +0.0 134,421 - -2.4 134,421 - +1.2 134,424 + -0.0 134,427 + +0.1 134,428 - +1.5 134,428 - +2.0 134,486 + -0.8 134,487 - +1.8 134,519 + +0.2 134,519 + -1.4 134,520 - -1.1 134,520 - +0.8 134,636 + +0.2 134,656 - +0.6 134,670 + +2.1 134,670 + +0.2 134,670 + -2.2 134,682 + +0.7 134,682 + -0.7 134,682 + -1.2 134,682 + +1.9 134,682 + -0.3 134,682 + -0.2 134,683 - -0.5 134,686 + +0.5 134,686 + +0.1 134,686 + -0.2 134,686 + +3.3 134,687 - -0.2 134,687 - -0.4 134,687 - +0.7 134,687 - -0.1 134,687 - +0.7 134,687 - -0.7 134,687 - +0.1 134,687 - +0.4 134,687 - -1.0 134,692 + -0.6 134,692 + -1.6 134,692 + -1.1 134,692 + -0.1 134,693 - -1.6 134,696 + -1.1 134,697 - -0.8 134,722 - +0.5 134,728 - +1.6 134,728 - +0.7 134,730 - -1.3 134,877 - Psest_0135 0.14 +1.6 134,920 + Psest_0135 0.19 -0.8 134,920 + Psest_0135 0.19 -0.6 135,008 + Psest_0135 0.29 -0.1 135,008 + Psest_0135 0.29 -0.4 135,008 + Psest_0135 0.29 -2.4 135,008 + Psest_0135 0.29 -0.8 135,008 + Psest_0135 0.29 +0.6 135,008 + Psest_0135 0.29 -2.1 135,008 + Psest_0135 0.29 +0.7 135,008 + Psest_0135 0.29 +1.6 135,008 + Psest_0135 0.29 -2.2 135,008 + Psest_0135 0.29 +0.4 135,009 - Psest_0135 0.29 +1.7 135,009 - Psest_0135 0.29 +0.0 135,009 - Psest_0135 0.29 +0.2 135,009 - Psest_0135 0.29 -0.1 135,009 - Psest_0135 0.29 -2.0 135,009 - Psest_0135 0.29 -1.7 135,009 - Psest_0135 0.29 -0.7 135,009 - Psest_0135 0.29 +1.3 135,081 + Psest_0135 0.37 -0.6 135,089 + Psest_0135 0.38 -1.1 135,090 - Psest_0135 0.38 +1.3 135,090 - Psest_0135 0.38 +1.2 135,090 - Psest_0135 0.38 +0.7 135,146 + Psest_0135 0.44 +0.6 135,146 + Psest_0135 0.44 +0.7 135,146 + Psest_0135 0.44 +1.8 135,146 + Psest_0135 0.44 +0.8 135,146 + Psest_0135 0.44 -0.7 135,146 + Psest_0135 0.44 -2.1 135,146 + Psest_0135 0.44 +0.5 135,146 + Psest_0135 0.44 +0.6 135,146 + Psest_0135 0.44 +1.1 135,147 - Psest_0135 0.44 -1.0 135,147 - Psest_0135 0.44 -0.2 135,147 - Psest_0135 0.44 -2.2 135,147 - Psest_0135 0.44 +1.6 135,147 - Psest_0135 0.44 -0.0 135,168 + Psest_0135 0.46 -2.4 135,169 - Psest_0135 0.47 +1.2 135,361 + Psest_0135 0.68 -0.7 135,362 - Psest_0135 0.68 +2.9
Or see this region's nucleotide sequence