Experiment: Furfuryl Alcohol 0.3 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0113 and Psest_0114 overlap by 4 nucleotides Psest_0114 and Psest_0115 are separated by 191 nucleotides Psest_0115 and Psest_0116 are separated by 16 nucleotides Psest_0116 and Psest_0117 overlap by 4 nucleotides
Psest_0113: Psest_0113 - Uncharacterized protein conserved in bacteria, at 111,773 to 112,414
_0113
Psest_0114: Psest_0114 - RNA polymerase sigma factor, sigma-70 family, at 112,411 to 112,980
_0114
Psest_0115: Psest_0115 - Predicted integral membrane protein, at 113,172 to 113,444
_0115
Psest_0116: Psest_0116 - Uncharacterized protein conserved in bacteria, at 113,461 to 114,288
_0116
Psest_0117: Psest_0117 - Uncharacterized protein conserved in bacteria (DUF2063)., at 114,285 to 115,076
_0117
Position (kb)
113
114 Strain fitness (log2 ratio)
-1
0
1
2
3 at 112.281 kb on + strand, within Psest_0113 at 112.281 kb on + strand, within Psest_0113 at 112.577 kb on - strand, within Psest_0114 at 112.789 kb on + strand, within Psest_0114 at 112.789 kb on + strand, within Psest_0114 at 112.968 kb on + strand at 112.969 kb on - strand at 112.969 kb on - strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.112 kb on + strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.113 kb on - strand at 113.384 kb on + strand, within Psest_0115 at 113.448 kb on + strand at 113.449 kb on - strand at 113.484 kb on - strand at 113.563 kb on + strand, within Psest_0116 at 113.563 kb on + strand, within Psest_0116 at 113.563 kb on + strand, within Psest_0116 at 113.563 kb on + strand, within Psest_0116 at 113.563 kb on + strand, within Psest_0116 at 113.563 kb on + strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.564 kb on - strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.767 kb on + strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.768 kb on - strand, within Psest_0116 at 113.888 kb on - strand, within Psest_0116 at 113.888 kb on - strand, within Psest_0116
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.3 vol% remove 112,281 + Psest_0113 0.79 +0.7 112,281 + Psest_0113 0.79 +0.5 112,577 - Psest_0114 0.29 +0.8 112,789 + Psest_0114 0.66 -1.5 112,789 + Psest_0114 0.66 +1.4 112,968 + -1.2 112,969 - -1.2 112,969 - -0.9 113,112 + +0.0 113,112 + +2.1 113,112 + -0.5 113,112 + -0.9 113,113 - +0.8 113,113 - -0.2 113,113 - +1.6 113,113 - -0.3 113,113 - -0.3 113,384 + Psest_0115 0.78 -0.7 113,448 + +2.3 113,449 - -0.4 113,484 - +1.3 113,563 + Psest_0116 0.12 -0.8 113,563 + Psest_0116 0.12 -0.7 113,563 + Psest_0116 0.12 -0.3 113,563 + Psest_0116 0.12 -0.3 113,563 + Psest_0116 0.12 -1.5 113,563 + Psest_0116 0.12 -0.5 113,564 - Psest_0116 0.12 +1.1 113,564 - Psest_0116 0.12 -0.1 113,564 - Psest_0116 0.12 -0.7 113,564 - Psest_0116 0.12 -0.9 113,564 - Psest_0116 0.12 -0.4 113,564 - Psest_0116 0.12 -0.4 113,564 - Psest_0116 0.12 +0.8 113,564 - Psest_0116 0.12 +1.0 113,767 + Psest_0116 0.37 +0.7 113,767 + Psest_0116 0.37 +0.3 113,767 + Psest_0116 0.37 -0.1 113,767 + Psest_0116 0.37 +2.8 113,767 + Psest_0116 0.37 -0.3 113,767 + Psest_0116 0.37 +0.1 113,768 - Psest_0116 0.37 -0.1 113,768 - Psest_0116 0.37 -0.1 113,768 - Psest_0116 0.37 +0.1 113,768 - Psest_0116 0.37 +0.7 113,768 - Psest_0116 0.37 -0.2 113,768 - Psest_0116 0.37 +1.8 113,768 - Psest_0116 0.37 -0.8 113,888 - Psest_0116 0.52 +1.1 113,888 - Psest_0116 0.52 -0.9
Or see this region's nucleotide sequence