Experiment: Furfuryl Alcohol 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3424 and Psest_3425 are separated by 100 nucleotides Psest_3425 and Psest_3426 overlap by 4 nucleotides Psest_3426 and Psest_3427 are separated by 228 nucleotides
Psest_3424: Psest_3424 - Predicted membrane protein, at 3,592,370 to 3,592,849
_3424
Psest_3425: Psest_3425 - Sortase and related acyltransferases, at 3,592,950 to 3,593,597
_3425
Psest_3426: Psest_3426 - Uncharacterized protein conserved in bacteria, at 3,593,594 to 3,594,223
_3426
Psest_3427: Psest_3427 - Transposase and inactivated derivatives, at 3,594,452 to 3,595,822
_3427
Position (kb)
3593
3594
3595 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3592.696 kb on - strand, within Psest_3424 at 3592.702 kb on - strand, within Psest_3424 at 3592.774 kb on + strand, within Psest_3424 at 3592.779 kb on + strand, within Psest_3424 at 3592.782 kb on - strand, within Psest_3424 at 3592.893 kb on - strand at 3592.920 kb on + strand at 3592.921 kb on - strand at 3593.035 kb on - strand, within Psest_3425 at 3593.072 kb on + strand, within Psest_3425 at 3593.087 kb on + strand, within Psest_3425 at 3593.087 kb on + strand, within Psest_3425 at 3593.088 kb on - strand, within Psest_3425 at 3593.088 kb on - strand, within Psest_3425 at 3593.091 kb on - strand, within Psest_3425 at 3593.286 kb on + strand, within Psest_3425 at 3593.286 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.289 kb on + strand, within Psest_3425 at 3593.290 kb on - strand, within Psest_3425 at 3593.290 kb on - strand, within Psest_3425 at 3593.290 kb on - strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.294 kb on + strand, within Psest_3425 at 3593.295 kb on - strand, within Psest_3425 at 3593.295 kb on - strand, within Psest_3425 at 3593.298 kb on + strand, within Psest_3425 at 3593.298 kb on + strand, within Psest_3425 at 3593.298 kb on + strand, within Psest_3425 at 3593.298 kb on + strand, within Psest_3425 at 3593.299 kb on - strand, within Psest_3425 at 3593.386 kb on + strand, within Psest_3425 at 3593.402 kb on + strand, within Psest_3425 at 3593.402 kb on + strand, within Psest_3425 at 3593.478 kb on + strand, within Psest_3425 at 3593.512 kb on + strand, within Psest_3425 at 3593.528 kb on - strand, within Psest_3425 at 3593.663 kb on - strand, within Psest_3426 at 3593.871 kb on + strand, within Psest_3426 at 3593.917 kb on + strand, within Psest_3426 at 3593.917 kb on + strand, within Psest_3426 at 3593.918 kb on - strand, within Psest_3426 at 3593.968 kb on - strand, within Psest_3426 at 3593.972 kb on + strand, within Psest_3426 at 3593.973 kb on - strand, within Psest_3426 at 3594.085 kb on + strand, within Psest_3426 at 3594.085 kb on + strand, within Psest_3426 at 3594.112 kb on + strand, within Psest_3426 at 3594.217 kb on + strand at 3594.217 kb on + strand at 3594.221 kb on + strand at 3594.222 kb on - strand at 3594.232 kb on + strand at 3594.310 kb on + strand at 3594.311 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.2 vol% remove 3,592,696 - Psest_3424 0.68 +0.5 3,592,702 - Psest_3424 0.69 -0.0 3,592,774 + Psest_3424 0.84 -0.3 3,592,779 + Psest_3424 0.85 +0.5 3,592,782 - Psest_3424 0.86 -0.8 3,592,893 - +1.9 3,592,920 + +0.1 3,592,921 - -1.1 3,593,035 - Psest_3425 0.13 -0.5 3,593,072 + Psest_3425 0.19 -2.5 3,593,087 + Psest_3425 0.21 +2.1 3,593,087 + Psest_3425 0.21 +0.6 3,593,088 - Psest_3425 0.21 -1.5 3,593,088 - Psest_3425 0.21 +0.0 3,593,091 - Psest_3425 0.22 -0.9 3,593,286 + Psest_3425 0.52 +2.0 3,593,286 + Psest_3425 0.52 -0.0 3,593,289 + Psest_3425 0.52 +0.0 3,593,289 + Psest_3425 0.52 -0.8 3,593,289 + Psest_3425 0.52 -1.2 3,593,289 + Psest_3425 0.52 -1.1 3,593,289 + Psest_3425 0.52 -0.6 3,593,289 + Psest_3425 0.52 +2.8 3,593,289 + Psest_3425 0.52 +0.7 3,593,289 + Psest_3425 0.52 -1.5 3,593,290 - Psest_3425 0.52 +1.0 3,593,290 - Psest_3425 0.52 +0.1 3,593,290 - Psest_3425 0.52 +0.4 3,593,294 + Psest_3425 0.53 -1.1 3,593,294 + Psest_3425 0.53 +0.0 3,593,294 + Psest_3425 0.53 -1.0 3,593,294 + Psest_3425 0.53 -0.0 3,593,294 + Psest_3425 0.53 +0.8 3,593,294 + Psest_3425 0.53 +1.4 3,593,295 - Psest_3425 0.53 -1.0 3,593,295 - Psest_3425 0.53 -0.3 3,593,298 + Psest_3425 0.54 +0.2 3,593,298 + Psest_3425 0.54 +0.1 3,593,298 + Psest_3425 0.54 -1.5 3,593,298 + Psest_3425 0.54 +0.1 3,593,299 - Psest_3425 0.54 -0.6 3,593,386 + Psest_3425 0.67 -0.3 3,593,402 + Psest_3425 0.70 +0.5 3,593,402 + Psest_3425 0.70 -1.4 3,593,478 + Psest_3425 0.81 +1.4 3,593,512 + Psest_3425 0.87 +1.1 3,593,528 - Psest_3425 0.89 +0.6 3,593,663 - Psest_3426 0.11 -1.6 3,593,871 + Psest_3426 0.44 -0.3 3,593,917 + Psest_3426 0.51 -1.2 3,593,917 + Psest_3426 0.51 -1.4 3,593,918 - Psest_3426 0.51 +1.1 3,593,968 - Psest_3426 0.59 -0.8 3,593,972 + Psest_3426 0.60 -0.8 3,593,973 - Psest_3426 0.60 -1.0 3,594,085 + Psest_3426 0.78 -2.6 3,594,085 + Psest_3426 0.78 -1.1 3,594,112 + Psest_3426 0.82 +0.2 3,594,217 + -0.9 3,594,217 + -1.5 3,594,221 + +0.6 3,594,222 - +0.8 3,594,232 + +0.5 3,594,310 + -1.0 3,594,311 - +2.2
Or see this region's nucleotide sequence