Experiment: Furfuryl Alcohol 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3407 and Psest_3408 are separated by 31 nucleotides Psest_3408 and Psest_3409 are separated by 104 nucleotides Psest_3409 and Psest_3410 overlap by 4 nucleotides
Psest_3407: Psest_3407 - Type I site-specific restriction-modification system, R (restriction) subunit and related helicases, at 3,576,550 to 3,579,753
_3407
Psest_3408: Psest_3408 - Predicted transcriptional regulators, at 3,579,785 to 3,580,006
_3408
Psest_3409: Psest_3409 - hypothetical protein, at 3,580,111 to 3,580,698
_3409
Psest_3410: Psest_3410 - DNA or RNA helicases of superfamily II, at 3,580,695 to 3,582,089
_3410
Position (kb)
3580
3581 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3579.185 kb on - strand, within Psest_3407 at 3579.185 kb on - strand, within Psest_3407 at 3579.185 kb on - strand, within Psest_3407 at 3579.217 kb on + strand, within Psest_3407 at 3579.260 kb on + strand, within Psest_3407 at 3579.261 kb on - strand, within Psest_3407 at 3579.273 kb on - strand, within Psest_3407 at 3579.273 kb on - strand, within Psest_3407 at 3579.273 kb on - strand, within Psest_3407 at 3579.287 kb on + strand, within Psest_3407 at 3579.288 kb on - strand, within Psest_3407 at 3579.332 kb on + strand, within Psest_3407 at 3579.332 kb on + strand, within Psest_3407 at 3579.332 kb on + strand, within Psest_3407 at 3579.332 kb on + strand, within Psest_3407 at 3579.332 kb on + strand, within Psest_3407 at 3579.333 kb on - strand, within Psest_3407 at 3579.333 kb on - strand, within Psest_3407 at 3579.333 kb on - strand, within Psest_3407 at 3579.359 kb on - strand, within Psest_3407 at 3579.450 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.533 kb on + strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.534 kb on - strand at 3579.639 kb on - strand at 3579.690 kb on - strand at 3579.690 kb on - strand at 3579.732 kb on + strand at 3579.733 kb on - strand at 3579.773 kb on + strand at 3579.773 kb on + strand at 3579.773 kb on + strand at 3579.773 kb on + strand at 3579.773 kb on + strand at 3579.786 kb on + strand at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.900 kb on + strand, within Psest_3408 at 3579.901 kb on - strand, within Psest_3408 at 3579.901 kb on - strand, within Psest_3408 at 3580.000 kb on + strand at 3580.001 kb on - strand at 3580.001 kb on - strand at 3580.001 kb on - strand at 3580.036 kb on + strand at 3580.037 kb on - strand at 3580.147 kb on + strand at 3580.147 kb on + strand at 3580.148 kb on - strand at 3580.207 kb on + strand, within Psest_3409 at 3580.261 kb on + strand, within Psest_3409 at 3580.336 kb on + strand, within Psest_3409 at 3580.337 kb on - strand, within Psest_3409 at 3580.337 kb on - strand, within Psest_3409 at 3580.556 kb on - strand, within Psest_3409 at 3580.575 kb on + strand, within Psest_3409 at 3580.575 kb on + strand, within Psest_3409 at 3580.575 kb on + strand, within Psest_3409 at 3580.576 kb on - strand, within Psest_3409 at 3580.576 kb on - strand, within Psest_3409 at 3580.668 kb on + strand at 3580.730 kb on + strand at 3580.731 kb on - strand at 3580.731 kb on - strand at 3580.736 kb on + strand at 3580.736 kb on + strand at 3580.889 kb on - strand, within Psest_3410 at 3580.889 kb on - strand, within Psest_3410 at 3580.924 kb on + strand, within Psest_3410 at 3580.924 kb on + strand, within Psest_3410 at 3580.925 kb on - strand, within Psest_3410 at 3580.925 kb on - strand, within Psest_3410 at 3580.968 kb on + strand, within Psest_3410 at 3580.969 kb on - strand, within Psest_3410 at 3580.969 kb on - strand, within Psest_3410 at 3580.974 kb on + strand, within Psest_3410 at 3580.975 kb on - strand, within Psest_3410 at 3580.975 kb on - strand, within Psest_3410 at 3580.975 kb on - strand, within Psest_3410 at 3580.975 kb on - strand, within Psest_3410 at 3580.989 kb on + strand, within Psest_3410 at 3581.107 kb on + strand, within Psest_3410 at 3581.108 kb on - strand, within Psest_3410 at 3581.239 kb on - strand, within Psest_3410 at 3581.287 kb on + strand, within Psest_3410 at 3581.288 kb on - strand, within Psest_3410 at 3581.288 kb on - strand, within Psest_3410 at 3581.342 kb on + strand, within Psest_3410 at 3581.342 kb on + strand, within Psest_3410 at 3581.369 kb on + strand, within Psest_3410 at 3581.397 kb on + strand, within Psest_3410 at 3581.397 kb on + strand, within Psest_3410 at 3581.398 kb on - strand, within Psest_3410 at 3581.407 kb on + strand, within Psest_3410 at 3581.408 kb on - strand, within Psest_3410 at 3581.408 kb on - strand, within Psest_3410 at 3581.408 kb on - strand, within Psest_3410 at 3581.408 kb on - strand, within Psest_3410 at 3581.408 kb on - strand, within Psest_3410 at 3581.506 kb on + strand, within Psest_3410 at 3581.507 kb on - strand, within Psest_3410 at 3581.507 kb on - strand, within Psest_3410 at 3581.537 kb on - strand, within Psest_3410 at 3581.608 kb on + strand, within Psest_3410 at 3581.608 kb on + strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.609 kb on - strand, within Psest_3410 at 3581.612 kb on + strand, within Psest_3410 at 3581.612 kb on + strand, within Psest_3410 at 3581.612 kb on + strand, within Psest_3410 at 3581.612 kb on + strand, within Psest_3410 at 3581.613 kb on - strand, within Psest_3410 at 3581.613 kb on - strand, within Psest_3410 at 3581.613 kb on - strand, within Psest_3410 at 3581.621 kb on + strand, within Psest_3410
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.2 vol% remove 3,579,185 - Psest_3407 0.82 -0.1 3,579,185 - Psest_3407 0.82 +0.2 3,579,185 - Psest_3407 0.82 +0.3 3,579,217 + Psest_3407 0.83 -1.0 3,579,260 + Psest_3407 0.85 +0.7 3,579,261 - Psest_3407 0.85 -0.2 3,579,273 - Psest_3407 0.85 -0.4 3,579,273 - Psest_3407 0.85 +2.3 3,579,273 - Psest_3407 0.85 -0.8 3,579,287 + Psest_3407 0.85 +0.3 3,579,288 - Psest_3407 0.85 -0.8 3,579,332 + Psest_3407 0.87 -0.2 3,579,332 + Psest_3407 0.87 -0.7 3,579,332 + Psest_3407 0.87 +0.2 3,579,332 + Psest_3407 0.87 +0.3 3,579,332 + Psest_3407 0.87 +1.1 3,579,333 - Psest_3407 0.87 +1.0 3,579,333 - Psest_3407 0.87 -1.4 3,579,333 - Psest_3407 0.87 -0.9 3,579,359 - Psest_3407 0.88 -0.0 3,579,450 + -1.1 3,579,533 + +0.5 3,579,533 + -0.8 3,579,533 + +1.4 3,579,533 + -1.6 3,579,533 + -0.9 3,579,533 + -1.8 3,579,533 + -1.0 3,579,534 - +2.1 3,579,534 - -2.1 3,579,534 - -0.9 3,579,534 - +0.8 3,579,534 - +1.4 3,579,534 - +1.5 3,579,534 - +1.1 3,579,534 - +0.3 3,579,534 - +0.3 3,579,534 - +1.1 3,579,639 - +1.6 3,579,690 - -1.2 3,579,690 - -1.1 3,579,732 + -2.8 3,579,733 - +0.9 3,579,773 + +0.6 3,579,773 + +1.1 3,579,773 + +1.1 3,579,773 + +1.1 3,579,773 + -0.9 3,579,786 + +2.7 3,579,900 + Psest_3408 0.52 -0.4 3,579,900 + Psest_3408 0.52 +1.0 3,579,900 + Psest_3408 0.52 +1.1 3,579,900 + Psest_3408 0.52 -1.5 3,579,900 + Psest_3408 0.52 -0.3 3,579,900 + Psest_3408 0.52 -1.4 3,579,900 + Psest_3408 0.52 +0.2 3,579,900 + Psest_3408 0.52 +1.0 3,579,900 + Psest_3408 0.52 -0.6 3,579,901 - Psest_3408 0.52 +0.3 3,579,901 - Psest_3408 0.52 +0.4 3,580,000 + +1.8 3,580,001 - +0.2 3,580,001 - +0.9 3,580,001 - -0.3 3,580,036 + -0.7 3,580,037 - +0.0 3,580,147 + +2.9 3,580,147 + -0.5 3,580,148 - +0.5 3,580,207 + Psest_3409 0.16 +0.3 3,580,261 + Psest_3409 0.26 +0.9 3,580,336 + Psest_3409 0.38 +0.2 3,580,337 - Psest_3409 0.38 +2.2 3,580,337 - Psest_3409 0.38 +1.8 3,580,556 - Psest_3409 0.76 +1.8 3,580,575 + Psest_3409 0.79 +0.5 3,580,575 + Psest_3409 0.79 +1.2 3,580,575 + Psest_3409 0.79 -0.5 3,580,576 - Psest_3409 0.79 +0.1 3,580,576 - Psest_3409 0.79 -1.1 3,580,668 + -0.7 3,580,730 + -0.0 3,580,731 - +1.2 3,580,731 - -0.9 3,580,736 + -0.6 3,580,736 + -0.2 3,580,889 - Psest_3410 0.14 +1.1 3,580,889 - Psest_3410 0.14 +1.1 3,580,924 + Psest_3410 0.16 +1.1 3,580,924 + Psest_3410 0.16 +1.1 3,580,925 - Psest_3410 0.16 -0.6 3,580,925 - Psest_3410 0.16 -0.9 3,580,968 + Psest_3410 0.20 +0.9 3,580,969 - Psest_3410 0.20 -0.0 3,580,969 - Psest_3410 0.20 -0.0 3,580,974 + Psest_3410 0.20 +1.1 3,580,975 - Psest_3410 0.20 -0.1 3,580,975 - Psest_3410 0.20 +1.2 3,580,975 - Psest_3410 0.20 -0.3 3,580,975 - Psest_3410 0.20 -0.3 3,580,989 + Psest_3410 0.21 +0.5 3,581,107 + Psest_3410 0.30 -0.8 3,581,108 - Psest_3410 0.30 -0.1 3,581,239 - Psest_3410 0.39 -0.2 3,581,287 + Psest_3410 0.42 +0.1 3,581,288 - Psest_3410 0.43 -1.6 3,581,288 - Psest_3410 0.43 +1.1 3,581,342 + Psest_3410 0.46 -0.1 3,581,342 + Psest_3410 0.46 -1.4 3,581,369 + Psest_3410 0.48 +0.4 3,581,397 + Psest_3410 0.50 +0.4 3,581,397 + Psest_3410 0.50 -0.1 3,581,398 - Psest_3410 0.50 -0.3 3,581,407 + Psest_3410 0.51 -0.3 3,581,408 - Psest_3410 0.51 +1.0 3,581,408 - Psest_3410 0.51 +1.1 3,581,408 - Psest_3410 0.51 +0.2 3,581,408 - Psest_3410 0.51 -0.1 3,581,408 - Psest_3410 0.51 +0.1 3,581,506 + Psest_3410 0.58 +1.9 3,581,507 - Psest_3410 0.58 -0.5 3,581,507 - Psest_3410 0.58 +0.7 3,581,537 - Psest_3410 0.60 +5.1 3,581,608 + Psest_3410 0.65 +1.8 3,581,608 + Psest_3410 0.65 +1.9 3,581,609 - Psest_3410 0.66 +0.3 3,581,609 - Psest_3410 0.66 -1.3 3,581,609 - Psest_3410 0.66 -0.3 3,581,609 - Psest_3410 0.66 +0.0 3,581,609 - Psest_3410 0.66 +0.4 3,581,609 - Psest_3410 0.66 -0.1 3,581,612 + Psest_3410 0.66 -0.5 3,581,612 + Psest_3410 0.66 -1.3 3,581,612 + Psest_3410 0.66 +0.3 3,581,612 + Psest_3410 0.66 +0.4 3,581,613 - Psest_3410 0.66 -0.2 3,581,613 - Psest_3410 0.66 -0.2 3,581,613 - Psest_3410 0.66 +1.9 3,581,621 + Psest_3410 0.66 +1.2
Or see this region's nucleotide sequence