Experiment: Furfuryl Alcohol 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2870 and Psest_2871 are separated by 101 nucleotides Psest_2871 and Psest_2872 are separated by 3 nucleotides
Psest_2870: Psest_2870 - TIGR00730 family protein, at 3,061,255 to 3,062,346
_2870
Psest_2871: Psest_2871 - Uncharacterized protein conserved in bacteria, at 3,062,448 to 3,062,912
_2871
Psest_2872: Psest_2872 - protein RecA, at 3,062,916 to 3,063,959
_2872
Position (kb)
3062
3063 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3061.452 kb on - strand, within Psest_2870 at 3061.898 kb on + strand, within Psest_2870 at 3061.898 kb on + strand, within Psest_2870 at 3061.921 kb on - strand, within Psest_2870 at 3061.924 kb on + strand, within Psest_2870 at 3061.924 kb on + strand, within Psest_2870 at 3061.924 kb on + strand, within Psest_2870 at 3061.975 kb on + strand, within Psest_2870 at 3061.975 kb on + strand, within Psest_2870 at 3061.975 kb on + strand, within Psest_2870 at 3061.976 kb on - strand, within Psest_2870 at 3062.054 kb on - strand, within Psest_2870 at 3062.137 kb on + strand, within Psest_2870 at 3062.138 kb on - strand, within Psest_2870 at 3062.392 kb on + strand at 3062.392 kb on + strand at 3062.393 kb on - strand at 3062.393 kb on - strand at 3062.396 kb on + strand at 3062.396 kb on + strand at 3062.396 kb on + strand at 3062.396 kb on + strand at 3062.396 kb on + strand at 3062.396 kb on + strand at 3062.397 kb on - strand at 3062.397 kb on - strand at 3062.397 kb on - strand at 3062.400 kb on + strand at 3062.400 kb on + strand at 3062.400 kb on + strand at 3062.859 kb on + strand, within Psest_2871 at 3062.894 kb on + strand at 3062.895 kb on - strand at 3062.949 kb on + strand at 3062.949 kb on + strand at 3063.086 kb on - strand, within Psest_2872 at 3063.158 kb on - strand, within Psest_2872 at 3063.311 kb on - strand, within Psest_2872 at 3063.311 kb on - strand, within Psest_2872 at 3063.699 kb on - strand, within Psest_2872 at 3063.770 kb on - strand, within Psest_2872
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.2 vol% remove 3,061,452 - Psest_2870 0.18 -0.8 3,061,898 + Psest_2870 0.59 -0.9 3,061,898 + Psest_2870 0.59 +0.0 3,061,921 - Psest_2870 0.61 +0.7 3,061,924 + Psest_2870 0.61 +0.1 3,061,924 + Psest_2870 0.61 -1.0 3,061,924 + Psest_2870 0.61 -0.6 3,061,975 + Psest_2870 0.66 -0.1 3,061,975 + Psest_2870 0.66 -0.6 3,061,975 + Psest_2870 0.66 -1.1 3,061,976 - Psest_2870 0.66 -0.6 3,062,054 - Psest_2870 0.73 -0.2 3,062,137 + Psest_2870 0.81 +0.2 3,062,138 - Psest_2870 0.81 -0.6 3,062,392 + +0.5 3,062,392 + +1.6 3,062,393 - +0.1 3,062,393 - -1.3 3,062,396 + +0.9 3,062,396 + +1.7 3,062,396 + +0.2 3,062,396 + +2.6 3,062,396 + -1.1 3,062,396 + +0.3 3,062,397 - +0.6 3,062,397 - +0.1 3,062,397 - +0.3 3,062,400 + +0.8 3,062,400 + -0.7 3,062,400 + -0.8 3,062,859 + Psest_2871 0.88 -0.4 3,062,894 + +0.0 3,062,895 - -0.0 3,062,949 + -0.5 3,062,949 + +0.5 3,063,086 - Psest_2872 0.16 -1.1 3,063,158 - Psest_2872 0.23 -1.5 3,063,311 - Psest_2872 0.38 +0.1 3,063,311 - Psest_2872 0.38 -1.8 3,063,699 - Psest_2872 0.75 -2.2 3,063,770 - Psest_2872 0.82 -1.1
Or see this region's nucleotide sequence