Experiment: Furfuryl Alcohol 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2541 and Psest_2542 are separated by 7 nucleotides Psest_2542 and Psest_2543 overlap by 4 nucleotides Psest_2543 and Psest_2544 are separated by 99 nucleotides
Psest_2541: Psest_2541 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 2,721,096 to 2,721,797
_2541
Psest_2542: Psest_2542 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 2,721,805 to 2,722,578
_2542
Psest_2543: Psest_2543 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 2,722,575 to 2,723,321
_2543
Psest_2544: Psest_2544 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 2,723,421 to 2,724,410
_2544
Position (kb)
2722
2723
2724 Strain fitness (log2 ratio)
-2
-1
0
1 at 2721.657 kb on + strand, within Psest_2541 at 2721.657 kb on + strand, within Psest_2541 at 2722.391 kb on + strand, within Psest_2542 at 2722.392 kb on - strand, within Psest_2542 at 2722.541 kb on + strand at 2722.541 kb on + strand at 2722.542 kb on - strand at 2722.542 kb on - strand at 2722.738 kb on + strand, within Psest_2543 at 2722.738 kb on + strand, within Psest_2543 at 2722.945 kb on + strand, within Psest_2543 at 2722.948 kb on + strand, within Psest_2543 at 2722.948 kb on + strand, within Psest_2543 at 2722.948 kb on + strand, within Psest_2543 at 2722.980 kb on + strand, within Psest_2543 at 2723.074 kb on + strand, within Psest_2543 at 2723.298 kb on + strand at 2723.299 kb on - strand at 2723.299 kb on - strand at 2723.299 kb on - strand at 2723.299 kb on - strand at 2723.299 kb on - strand at 2723.299 kb on - strand at 2723.602 kb on - strand, within Psest_2544 at 2723.662 kb on + strand, within Psest_2544 at 2723.662 kb on + strand, within Psest_2544 at 2723.662 kb on + strand, within Psest_2544 at 2723.663 kb on - strand, within Psest_2544 at 2723.812 kb on - strand, within Psest_2544 at 2723.812 kb on - strand, within Psest_2544 at 2723.827 kb on + strand, within Psest_2544 at 2723.828 kb on - strand, within Psest_2544 at 2723.828 kb on - strand, within Psest_2544 at 2723.828 kb on - strand, within Psest_2544 at 2724.124 kb on - strand, within Psest_2544
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.2 vol% remove 2,721,657 + Psest_2541 0.80 +1.1 2,721,657 + Psest_2541 0.80 -0.8 2,722,391 + Psest_2542 0.76 +0.3 2,722,392 - Psest_2542 0.76 -0.3 2,722,541 + -0.6 2,722,541 + +0.3 2,722,542 - -0.2 2,722,542 - +1.3 2,722,738 + Psest_2543 0.22 -2.1 2,722,738 + Psest_2543 0.22 -0.8 2,722,945 + Psest_2543 0.50 -1.1 2,722,948 + Psest_2543 0.50 +0.9 2,722,948 + Psest_2543 0.50 -0.2 2,722,948 + Psest_2543 0.50 -1.1 2,722,980 + Psest_2543 0.54 -0.2 2,723,074 + Psest_2543 0.67 -1.5 2,723,298 + +1.4 2,723,299 - -0.8 2,723,299 - -0.0 2,723,299 - -1.9 2,723,299 - -0.7 2,723,299 - -0.0 2,723,299 - -0.8 2,723,602 - Psest_2544 0.18 +0.7 2,723,662 + Psest_2544 0.24 -0.6 2,723,662 + Psest_2544 0.24 +0.5 2,723,662 + Psest_2544 0.24 +1.0 2,723,663 - Psest_2544 0.24 -1.3 2,723,812 - Psest_2544 0.39 -1.4 2,723,812 - Psest_2544 0.39 +0.9 2,723,827 + Psest_2544 0.41 -0.6 2,723,828 - Psest_2544 0.41 +1.0 2,723,828 - Psest_2544 0.41 +0.9 2,723,828 - Psest_2544 0.41 +0.5 2,724,124 - Psest_2544 0.71 +0.9
Or see this region's nucleotide sequence