Experiment: Furfuryl Alcohol 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2440 and Psest_2441 are separated by 66 nucleotides Psest_2441 and Psest_2442 are separated by 416 nucleotides Psest_2442 and Psest_2443 are separated by 314 nucleotides
Psest_2440: Psest_2440 - isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) , at 2,608,328 to 2,609,479
_2440
Psest_2441: Psest_2441 - hypothetical protein, at 2,609,546 to 2,610,103
_2441
Psest_2442: Psest_2442 - hypothetical protein, at 2,610,520 to 2,610,648
_2442
Psest_2443: Psest_2443 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,610,963 to 2,612,045
_2443
Position (kb)
2609
2610
2611 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2608.632 kb on - strand, within Psest_2440 at 2609.120 kb on + strand, within Psest_2440 at 2609.469 kb on - strand at 2609.469 kb on - strand at 2609.469 kb on - strand at 2609.475 kb on + strand at 2609.476 kb on - strand at 2609.477 kb on + strand at 2609.478 kb on - strand at 2609.669 kb on + strand, within Psest_2441 at 2609.724 kb on - strand, within Psest_2441 at 2609.735 kb on - strand, within Psest_2441 at 2609.735 kb on - strand, within Psest_2441 at 2609.859 kb on + strand, within Psest_2441 at 2609.859 kb on + strand, within Psest_2441 at 2609.859 kb on + strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.860 kb on - strand, within Psest_2441 at 2609.945 kb on + strand, within Psest_2441 at 2609.946 kb on - strand, within Psest_2441 at 2609.946 kb on - strand, within Psest_2441 at 2610.010 kb on + strand, within Psest_2441 at 2610.010 kb on + strand, within Psest_2441 at 2610.034 kb on - strand, within Psest_2441 at 2610.050 kb on + strand at 2610.239 kb on + strand at 2610.239 kb on + strand at 2610.239 kb on + strand at 2610.384 kb on + strand at 2610.384 kb on + strand at 2610.384 kb on + strand at 2610.384 kb on + strand at 2610.385 kb on - strand at 2610.385 kb on - strand at 2610.385 kb on - strand at 2610.385 kb on - strand at 2610.385 kb on - strand at 2610.385 kb on - strand at 2610.419 kb on + strand at 2610.468 kb on - strand at 2610.614 kb on - strand, within Psest_2442 at 2610.614 kb on - strand, within Psest_2442 at 2610.614 kb on - strand, within Psest_2442 at 2610.665 kb on + strand at 2610.665 kb on + strand at 2610.666 kb on - strand at 2610.669 kb on - strand at 2610.689 kb on + strand at 2610.707 kb on + strand at 2610.708 kb on - strand at 2610.749 kb on - strand at 2610.800 kb on + strand at 2610.809 kb on - strand at 2610.818 kb on - strand at 2610.818 kb on - strand at 2610.818 kb on - strand at 2610.873 kb on + strand at 2610.873 kb on + strand at 2610.874 kb on - strand at 2610.874 kb on - strand at 2610.875 kb on + strand at 2610.875 kb on + strand at 2610.876 kb on - strand at 2610.881 kb on - strand at 2610.913 kb on + strand at 2610.914 kb on - strand at 2610.914 kb on - strand at 2611.019 kb on + strand at 2611.019 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.2 vol% remove 2,608,632 - Psest_2440 0.26 -0.4 2,609,120 + Psest_2440 0.69 +0.1 2,609,469 - -0.5 2,609,469 - +0.7 2,609,469 - +0.0 2,609,475 + +1.1 2,609,476 - -0.8 2,609,477 + +2.0 2,609,478 - -1.7 2,609,669 + Psest_2441 0.22 +1.6 2,609,724 - Psest_2441 0.32 +0.9 2,609,735 - Psest_2441 0.34 +1.4 2,609,735 - Psest_2441 0.34 -0.5 2,609,859 + Psest_2441 0.56 +0.5 2,609,859 + Psest_2441 0.56 -1.0 2,609,859 + Psest_2441 0.56 -0.2 2,609,860 - Psest_2441 0.56 +0.5 2,609,860 - Psest_2441 0.56 +1.3 2,609,860 - Psest_2441 0.56 +0.5 2,609,860 - Psest_2441 0.56 +0.9 2,609,860 - Psest_2441 0.56 -2.3 2,609,860 - Psest_2441 0.56 +1.2 2,609,860 - Psest_2441 0.56 -0.3 2,609,860 - Psest_2441 0.56 +0.8 2,609,860 - Psest_2441 0.56 +2.3 2,609,860 - Psest_2441 0.56 +0.0 2,609,860 - Psest_2441 0.56 +0.2 2,609,945 + Psest_2441 0.72 -0.4 2,609,946 - Psest_2441 0.72 -0.3 2,609,946 - Psest_2441 0.72 +0.7 2,610,010 + Psest_2441 0.83 +0.4 2,610,010 + Psest_2441 0.83 +0.8 2,610,034 - Psest_2441 0.87 +0.8 2,610,050 + -0.6 2,610,239 + -1.0 2,610,239 + -0.9 2,610,239 + +1.1 2,610,384 + -0.8 2,610,384 + +1.2 2,610,384 + -0.1 2,610,384 + +2.2 2,610,385 - -0.7 2,610,385 - -0.3 2,610,385 - -0.1 2,610,385 - +0.9 2,610,385 - +1.1 2,610,385 - -0.5 2,610,419 + +0.1 2,610,468 - +0.4 2,610,614 - Psest_2442 0.73 +0.5 2,610,614 - Psest_2442 0.73 -1.6 2,610,614 - Psest_2442 0.73 +0.0 2,610,665 + -0.7 2,610,665 + +1.3 2,610,666 - +0.9 2,610,669 - +0.3 2,610,689 + +1.0 2,610,707 + +0.7 2,610,708 - +1.1 2,610,749 - +0.3 2,610,800 + -1.8 2,610,809 - +0.9 2,610,818 - -0.3 2,610,818 - -0.5 2,610,818 - +0.2 2,610,873 + -1.0 2,610,873 + +2.1 2,610,874 - +1.5 2,610,874 - -0.1 2,610,875 + -1.8 2,610,875 + -0.6 2,610,876 - +0.6 2,610,881 - +0.1 2,610,913 + +0.5 2,610,914 - -0.2 2,610,914 - -0.8 2,611,019 + -0.5 2,611,019 + -0.2
Or see this region's nucleotide sequence