Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4300 and Psest_4301 overlap by 4 nucleotides Psest_4301 and Psest_4302 overlap by 4 nucleotides
Psest_4300: Psest_4300 - PAS domain S-box, at 4,496,349 to 4,499,219
_4300
Psest_4301: Psest_4301 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 4,499,216 to 4,499,605
_4301
Psest_4302: Psest_4302 - hypothetical protein, at 4,499,602 to 4,500,738
_4302
Position (kb)
4499
4500 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4498.423 kb on + strand, within Psest_4300 at 4498.423 kb on + strand, within Psest_4300 at 4498.423 kb on + strand, within Psest_4300 at 4498.423 kb on + strand, within Psest_4300 at 4498.424 kb on - strand, within Psest_4300 at 4498.424 kb on - strand, within Psest_4300 at 4498.460 kb on + strand, within Psest_4300 at 4498.522 kb on - strand, within Psest_4300 at 4498.726 kb on + strand, within Psest_4300 at 4498.814 kb on - strand, within Psest_4300 at 4498.873 kb on + strand, within Psest_4300 at 4498.873 kb on + strand, within Psest_4300 at 4498.873 kb on + strand, within Psest_4300 at 4498.874 kb on - strand, within Psest_4300 at 4499.286 kb on - strand, within Psest_4301 at 4499.286 kb on - strand, within Psest_4301 at 4499.286 kb on - strand, within Psest_4301 at 4499.286 kb on - strand, within Psest_4301 at 4499.286 kb on - strand, within Psest_4301 at 4499.402 kb on + strand, within Psest_4301 at 4499.534 kb on + strand, within Psest_4301 at 4499.534 kb on + strand, within Psest_4301 at 4499.535 kb on - strand, within Psest_4301 at 4499.535 kb on - strand, within Psest_4301 at 4499.535 kb on - strand, within Psest_4301 at 4499.821 kb on + strand, within Psest_4302 at 4499.822 kb on - strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.424 kb on + strand, within Psest_4302 at 4500.449 kb on - strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.520 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.536 kb on - strand, within Psest_4302
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.008 mg/ml remove 4,498,423 + Psest_4300 0.72 -2.6 4,498,423 + Psest_4300 0.72 -0.6 4,498,423 + Psest_4300 0.72 -1.7 4,498,423 + Psest_4300 0.72 -0.0 4,498,424 - Psest_4300 0.72 +0.8 4,498,424 - Psest_4300 0.72 +0.6 4,498,460 + Psest_4300 0.74 +0.8 4,498,522 - Psest_4300 0.76 -0.1 4,498,726 + Psest_4300 0.83 +2.1 4,498,814 - Psest_4300 0.86 +0.7 4,498,873 + Psest_4300 0.88 +0.2 4,498,873 + Psest_4300 0.88 +2.0 4,498,873 + Psest_4300 0.88 +0.0 4,498,874 - Psest_4300 0.88 -0.8 4,499,286 - Psest_4301 0.18 -2.1 4,499,286 - Psest_4301 0.18 -0.9 4,499,286 - Psest_4301 0.18 -0.5 4,499,286 - Psest_4301 0.18 -2.9 4,499,286 - Psest_4301 0.18 -0.1 4,499,402 + Psest_4301 0.48 -1.5 4,499,534 + Psest_4301 0.82 -0.4 4,499,534 + Psest_4301 0.82 +1.8 4,499,535 - Psest_4301 0.82 +0.4 4,499,535 - Psest_4301 0.82 -0.2 4,499,535 - Psest_4301 0.82 +0.0 4,499,821 + Psest_4302 0.19 +0.4 4,499,822 - Psest_4302 0.19 +1.0 4,500,133 + Psest_4302 0.47 -1.7 4,500,133 + Psest_4302 0.47 +0.7 4,500,133 + Psest_4302 0.47 +0.3 4,500,134 - Psest_4302 0.47 +1.9 4,500,134 - Psest_4302 0.47 -0.3 4,500,134 - Psest_4302 0.47 -0.8 4,500,290 - Psest_4302 0.61 -0.1 4,500,290 - Psest_4302 0.61 -0.1 4,500,290 - Psest_4302 0.61 +2.1 4,500,290 - Psest_4302 0.61 +0.2 4,500,290 - Psest_4302 0.61 -1.5 4,500,424 + Psest_4302 0.72 +1.0 4,500,449 - Psest_4302 0.74 +2.1 4,500,514 + Psest_4302 0.80 +0.2 4,500,514 + Psest_4302 0.80 -1.9 4,500,514 + Psest_4302 0.80 +0.4 4,500,515 - Psest_4302 0.80 +0.9 4,500,515 - Psest_4302 0.80 -2.1 4,500,515 - Psest_4302 0.80 -0.3 4,500,517 + Psest_4302 0.80 -0.6 4,500,517 + Psest_4302 0.80 -0.5 4,500,517 + Psest_4302 0.80 -1.0 4,500,517 + Psest_4302 0.80 +0.3 4,500,517 + Psest_4302 0.80 +0.4 4,500,517 + Psest_4302 0.80 -0.2 4,500,517 + Psest_4302 0.80 +1.6 4,500,518 - Psest_4302 0.81 -0.2 4,500,518 - Psest_4302 0.81 +1.9 4,500,518 - Psest_4302 0.81 +0.1 4,500,518 - Psest_4302 0.81 +0.1 4,500,518 - Psest_4302 0.81 +1.1 4,500,518 - Psest_4302 0.81 +1.5 4,500,520 + Psest_4302 0.81 +1.6 4,500,535 + Psest_4302 0.82 -0.3 4,500,535 + Psest_4302 0.82 -0.5 4,500,535 + Psest_4302 0.82 -0.4 4,500,536 - Psest_4302 0.82 -1.8
Or see this region's nucleotide sequence