Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4300

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
4,495,390	+		Psest_4299	0.49	+0.8
4,495,579	+		Psest_4299	0.61	-0.4
4,495,579	+		Psest_4299	0.61	+3.1
4,495,579	+		Psest_4299	0.61	+0.1
4,495,579	+		Psest_4299	0.61	-0.2
4,495,579	+		Psest_4299	0.61	+1.4
4,495,580	-		Psest_4299	0.61	-1.5
4,495,580	-		Psest_4299	0.61	+0.6
4,495,580	-		Psest_4299	0.61	+1.7
4,495,580	-		Psest_4299	0.61	+0.2
4,495,580	-		Psest_4299	0.61	-0.1
4,495,665	+		Psest_4299	0.66	-2.0
4,495,685	+		Psest_4299	0.67	+1.0
4,495,685	+		Psest_4299	0.67	+0.5
4,495,685	+		Psest_4299	0.67	+1.3
4,495,685	+		Psest_4299	0.67	-0.6
4,495,685	+		Psest_4299	0.67	+0.4
4,495,686	-		Psest_4299	0.67	+1.5
4,495,686	-		Psest_4299	0.67	-0.3
4,495,686	-		Psest_4299	0.67	+0.9
4,495,687	+		Psest_4299	0.67	-0.3
4,495,687	+		Psest_4299	0.67	-2.0
4,495,687	+		Psest_4299	0.67	+0.5
4,495,688	-		Psest_4299	0.67	+0.0
4,495,688	-		Psest_4299	0.67	-2.0
4,495,688	-		Psest_4299	0.67	+1.4
4,495,688	-		Psest_4299	0.67	-0.6
4,495,869	+		Psest_4299	0.79	-1.6
4,495,869	+		Psest_4299	0.79	-2.6
4,495,874	-		Psest_4299	0.79	+1.1
4,496,086	+				-0.2
4,496,086	+				+0.6
4,496,086	+				+0.4
4,496,087	-				+0.3
4,496,087	-				-1.4
4,496,087	-				-1.8
4,496,142	-				+0.5
4,496,142	-				+1.3
4,496,142	-				+2.0
4,496,170	+				-0.1
4,496,170	+				-0.6
4,496,170	+				+1.0
4,496,171	-				-0.8
4,496,171	-				-1.6
4,496,202	-				-0.6
4,496,202	-				+2.0
4,496,202	-				-0.5
4,496,219	-				+0.3
4,496,219	-				-1.7
4,496,266	+				+2.4
4,496,266	+				+1.1
4,496,266	+				+3.3
4,496,267	-				-0.9
4,496,267	-				-0.2
4,496,267	-				+1.2
4,496,268	+				-0.8
4,496,268	+				+1.7
4,496,268	+				+0.9
4,496,268	+				+0.3
4,496,269	-				+0.2
4,496,269	-				-2.5
4,496,269	-				+1.2
4,496,269	-				-2.6
4,496,269	-				-1.1
4,496,269	-				+0.1
4,496,324	+				+3.8
4,496,324	+				+0.6
4,496,324	+				-0.5
4,496,325	-				-2.3
4,496,325	-				-1.6
4,496,325	-				+1.1
4,496,325	-				+3.3
4,496,325	-				+1.0
4,496,577	+				-0.5
4,496,577	+				-2.0
4,496,577	+				+0.6
4,496,578	-				-0.4
4,496,589	+				+0.8
4,496,622	-				+1.5
4,496,658	+		Psest_4300	0.11	+1.6
4,496,966	-		Psest_4300	0.21	-0.7
4,496,972	+		Psest_4300	0.22	-1.9
4,497,057	+		Psest_4300	0.25	+0.8
4,497,058	-		Psest_4300	0.25	-0.4
4,497,991	-		Psest_4300	0.57	+0.3
4,498,139	-		Psest_4300	0.62	+2.0
4,498,139	-		Psest_4300	0.62	-0.1
4,498,423	+		Psest_4300	0.72	-2.6
4,498,423	+		Psest_4300	0.72	-0.6
4,498,423	+		Psest_4300	0.72	-1.7
4,498,423	+		Psest_4300	0.72	-0.0
4,498,424	-		Psest_4300	0.72	+0.8
4,498,424	-		Psest_4300	0.72	+0.6
4,498,460	+		Psest_4300	0.74	+0.8
4,498,522	-		Psest_4300	0.76	-0.1
4,498,726	+		Psest_4300	0.83	+2.1
4,498,814	-		Psest_4300	0.86	+0.7
4,498,873	+		Psest_4300	0.88	+0.2
4,498,873	+		Psest_4300	0.88	+2.0
4,498,873	+		Psest_4300	0.88	+0.0
4,498,874	-		Psest_4300	0.88	-0.8
4,499,286	-		Psest_4301	0.18	-2.1
4,499,286	-		Psest_4301	0.18	-0.9
4,499,286	-		Psest_4301	0.18	-0.5
4,499,286	-		Psest_4301	0.18	-2.9
4,499,286	-		Psest_4301	0.18	-0.1
4,499,402	+		Psest_4301	0.48	-1.5
4,499,534	+		Psest_4301	0.82	-0.4
4,499,534	+		Psest_4301	0.82	+1.8
4,499,535	-		Psest_4301	0.82	+0.4
4,499,535	-		Psest_4301	0.82	-0.2
4,499,535	-		Psest_4301	0.82	+0.0
4,499,821	+		Psest_4302	0.19	+0.4
4,499,822	-		Psest_4302	0.19	+1.0
4,500,133	+		Psest_4302	0.47	-1.7
4,500,133	+		Psest_4302	0.47	+0.7
4,500,133	+		Psest_4302	0.47	+0.3
4,500,134	-		Psest_4302	0.47	+1.9
4,500,134	-		Psest_4302	0.47	-0.3
4,500,134	-		Psest_4302	0.47	-0.8