Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3200

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,370,966	+		Psest_3198	0.82	-0.2
3,370,966	+		Psest_3198	0.82	-0.2
3,370,966	+		Psest_3198	0.82	+1.9
3,370,966	+		Psest_3198	0.82	-0.8
3,370,966	+		Psest_3198	0.82	-1.6
3,370,966	+		Psest_3198	0.82	-1.8
3,370,966	+		Psest_3198	0.82	+1.1
3,370,967	-		Psest_3198	0.82	-1.2
3,370,967	-		Psest_3198	0.82	+0.3
3,370,967	-		Psest_3198	0.82	+1.5
3,370,967	-		Psest_3198	0.82	+0.5
3,370,967	-		Psest_3198	0.82	+0.9
3,370,967	-		Psest_3198	0.82	+1.0
3,370,967	-		Psest_3198	0.82	+0.1
3,370,967	-		Psest_3198	0.82	+0.4
3,370,967	-		Psest_3198	0.82	-1.1
3,370,969	-		Psest_3198	0.82	-0.0
3,371,098	+				-1.4
3,371,098	+				-1.7
3,371,098	+				-0.2
3,371,098	+				-0.5
3,371,098	+				+1.8
3,371,098	+				+1.4
3,371,098	+				-0.1
3,371,162	+				+0.9
3,371,162	+				-2.1
3,371,163	-				-0.4
3,371,571	-		Psest_3199	0.61	-0.6
3,371,606	+		Psest_3199	0.65	-1.6
3,371,606	+		Psest_3199	0.65	-0.6
3,371,606	+		Psest_3199	0.65	+0.2
3,371,607	-		Psest_3199	0.65	+1.0
3,371,607	-		Psest_3199	0.65	-0.6
3,371,607	-		Psest_3199	0.65	-1.5
3,371,607	-		Psest_3199	0.65	+0.7
3,371,607	-		Psest_3199	0.65	-0.5
3,371,607	-		Psest_3199	0.65	+0.5
3,371,684	+		Psest_3199	0.75	-0.7
3,371,685	-		Psest_3199	0.75	-1.9
3,371,741	+		Psest_3199	0.83	+0.3
3,371,883	+				+0.1
3,371,898	-				-0.2
3,371,915	+				-0.6
3,371,915	+				+0.1
3,371,915	+				-2.7
3,371,915	+				-2.8
3,371,915	+				+1.0
3,371,916	-				-3.2
3,371,916	-				-0.0
3,371,973	-		Psest_3200	0.11	+0.5
3,372,059	+		Psest_3200	0.26	-0.8
3,372,060	-		Psest_3200	0.26	-1.9
3,372,060	-		Psest_3200	0.26	-2.2
3,372,060	-		Psest_3200	0.26	-2.0
3,372,182	+		Psest_3200	0.48	-2.4
3,372,183	-		Psest_3200	0.48	-0.7
3,372,183	-		Psest_3200	0.48	-2.4
3,372,324	+		Psest_3200	0.72	-1.0
3,372,325	-		Psest_3200	0.73	-0.8
3,372,325	-		Psest_3200	0.73	+0.6
3,372,325	-		Psest_3200	0.73	+0.6
3,372,325	-		Psest_3200	0.73	-2.2
3,372,479	+				-2.4
3,372,539	+				+1.3
3,372,540	-				-1.7
3,372,588	-		Psest_3201	0.12	-0.3
3,372,766	+		Psest_3201	0.35	-0.4
3,372,766	+		Psest_3201	0.35	+0.1
3,372,766	+		Psest_3201	0.35	-1.3
3,372,766	+		Psest_3201	0.35	+1.6
3,372,766	+		Psest_3201	0.35	+0.9
3,372,766	+		Psest_3201	0.35	+1.2
3,372,766	+		Psest_3201	0.35	-0.4
3,372,767	-		Psest_3201	0.35	+0.6
3,372,767	-		Psest_3201	0.35	-0.9
3,372,767	-		Psest_3201	0.35	-2.3
3,372,767	-		Psest_3201	0.35	+2.8
3,372,767	-		Psest_3201	0.35	-0.8
3,372,767	-		Psest_3201	0.35	-0.4
3,372,767	-		Psest_3201	0.35	-0.2
3,372,834	+		Psest_3201	0.43	-1.3
3,372,834	+		Psest_3201	0.43	+0.3
3,373,290	+				+0.0
3,373,290	+				+1.1
3,373,290	+				+1.7
3,373,290	+				+0.3
3,373,290	+				+0.1
3,373,291	-				+0.9
3,373,291	-				-1.1
3,373,291	-				+0.7
3,373,291	-				-1.0
3,373,464	+		Psest_3202	0.19	-1.2
3,373,464	+		Psest_3202	0.19	+0.5