Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1880

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,990,558	+		Psest_1879	0.61	-0.8
1,990,558	+		Psest_1879	0.61	-0.8
1,990,558	+		Psest_1879	0.61	+0.2
1,990,558	+		Psest_1879	0.61	-0.5
1,990,558	-		Psest_1879	0.61	+0.2
1,990,559	-		Psest_1879	0.61	-0.9
1,990,559	-		Psest_1879	0.61	+0.1
1,990,904	-		Psest_1879	0.85	-1.2
1,990,904	-		Psest_1879	0.85	-1.1
1,991,125	+				-1.1
1,991,126	-				+0.2
1,991,126	-				-0.5
1,991,126	-				+3.1
1,991,163	+				-0.8
1,991,258	+				-0.3
1,991,258	+				+2.3
1,991,258	+				-1.3
1,991,258	+				-1.4
1,991,259	-				+0.5
1,991,259	-				-1.5
1,991,259	-				+1.6
1,991,259	-				-0.5
1,991,259	-				+0.5
1,991,259	-				+1.8
1,991,259	-				+0.9
1,991,259	-				+1.3
1,991,259	-				+0.5
1,991,259	-				+1.6
1,991,356	+		Psest_1880	0.12	-0.2
1,991,357	-		Psest_1880	0.12	-2.3
1,991,374	+		Psest_1880	0.17	+1.2
1,991,374	+		Psest_1880	0.17	-2.9
1,991,374	+		Psest_1880	0.17	-1.9
1,991,374	+		Psest_1880	0.17	+1.4
1,991,374	+		Psest_1880	0.17	+0.6
1,991,375	-		Psest_1880	0.17	+0.1
1,991,375	-		Psest_1880	0.17	-1.4
1,991,504	+		Psest_1880	0.52	-0.4
1,991,504	+		Psest_1880	0.52	-0.1
1,991,504	+		Psest_1880	0.52	+0.1
1,991,504	+		Psest_1880	0.52	+0.3
1,991,504	+		Psest_1880	0.52	+1.1
1,991,505	-		Psest_1880	0.52	+1.1
1,991,505	-		Psest_1880	0.52	-0.4
1,991,530	+		Psest_1880	0.59	-1.1
1,991,530	+		Psest_1880	0.59	-0.1
1,991,530	+		Psest_1880	0.59	-0.8
1,991,530	+		Psest_1880	0.59	-0.2
1,991,530	+		Psest_1880	0.59	-3.2
1,991,531	-		Psest_1880	0.59	-0.2
1,991,531	-		Psest_1880	0.59	-1.8
1,991,531	-		Psest_1880	0.59	-0.5
1,991,531	-		Psest_1880	0.59	+0.1
1,991,531	-		Psest_1880	0.59	-2.3
1,991,738	+				+1.1
1,991,738	+				+0.2
1,991,763	+				-0.8
1,992,199	+		Psest_1881	0.75	-0.2
1,992,199	+		Psest_1881	0.75	+0.5
1,992,199	+		Psest_1881	0.75	-0.7
1,992,199	+		Psest_1881	0.75	-1.5
1,992,200	-		Psest_1881	0.75	+0.2
1,992,200	-		Psest_1881	0.75	-0.6
1,992,250	-		Psest_1881	0.84	+0.8
1,992,339	+				-1.9
1,992,339	+				-0.3
1,992,340	-				+0.2
1,992,340	-				+1.2
1,992,340	-				-1.8
1,992,340	-				+0.6
1,992,578	+		Psest_1882	0.18	+1.0