Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1776

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,875,289	+				+0.1
1,875,331	+				+1.5
1,875,664	+		Psest_1775	0.37	-0.8
1,875,665	-		Psest_1775	0.37	-1.5
1,875,665	-		Psest_1775	0.37	+1.6
1,875,740	+		Psest_1775	0.45	+0.9
1,875,740	+		Psest_1775	0.45	+1.9
1,875,740	+		Psest_1775	0.45	+1.4
1,875,741	-		Psest_1775	0.45	-2.6
1,875,741	-		Psest_1775	0.45	+1.1
1,875,872	-		Psest_1775	0.60	-1.1
1,876,039	+		Psest_1775	0.79	+0.8
1,876,361	+		Psest_1776	0.12	+0.2
1,876,361	+		Psest_1776	0.12	+0.3
1,876,362	-		Psest_1776	0.12	-0.6
1,876,362	-		Psest_1776	0.12	-2.3
1,876,527	+		Psest_1776	0.36	-0.3
1,876,528	-		Psest_1776	0.37	-1.5
1,876,630	+		Psest_1776	0.52	-0.3
1,876,656	+		Psest_1776	0.55	-0.0
1,876,656	+		Psest_1776	0.55	-2.5
1,876,656	+		Psest_1776	0.55	+0.1
1,876,657	-		Psest_1776	0.56	+0.7
1,876,657	-		Psest_1776	0.56	-0.9
1,876,666	-		Psest_1776	0.57	+0.3
1,876,683	-		Psest_1776	0.59	+0.5
1,876,749	+		Psest_1776	0.69	-2.4
1,876,833	+		Psest_1776	0.82	+1.9
1,876,833	+		Psest_1776	0.82	-2.0
1,876,912	+				-2.6
1,876,913	-				+0.1
1,876,957	+				-0.5
1,876,957	+				-1.3
1,876,957	+				+3.4
1,876,957	+				+0.1
1,876,957	+				+0.1
1,876,957	+				-0.6
1,876,957	+				-0.1
1,876,958	-				-0.3
1,876,958	-				-1.0
1,876,958	-				-2.0
1,876,958	-				-0.7
1,876,958	-				-2.5
1,876,958	-				+2.1
1,876,958	-				+1.9
1,876,958	-				-0.6
1,876,958	-				-2.7
1,876,958	-				-1.2
1,876,958	-				+1.1
1,877,019	+				-1.9
1,877,172	+		Psest_1777	0.20	+0.0
1,877,172	+		Psest_1777	0.20	-0.9
1,877,173	-		Psest_1777	0.21	-0.6
1,877,283	+		Psest_1777	0.35	+1.0
1,877,459	+		Psest_1777	0.58	-0.9
1,877,459	+		Psest_1777	0.58	-1.3
1,877,460	-		Psest_1777	0.58	+0.4
1,877,460	-		Psest_1777	0.58	+0.9
1,877,718	+				+0.2
1,877,719	-				+0.5
1,877,753	+				+0.0
1,877,754	-				-1.0
1,877,770	+				+0.9
1,877,770	+				-0.5
1,877,770	+				+0.9
1,877,770	+				-1.6
1,877,770	+				+0.3
1,877,771	-				-0.5
1,877,771	-				-1.1
1,877,771	-				-0.7
1,877,771	-				-0.2
1,877,822	+				+0.9
1,877,822	+				-0.7
1,877,846	-				+0.0
1,877,890	+				+1.9
1,877,890	+				-0.8
1,877,891	-				-0.3
1,877,918	+				+0.6
1,877,918	+				+0.1
1,877,918	+				+0.6
1,877,918	+				+1.2