Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1312

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,412,302	+		Psest_1311	0.46	+0.6
1,412,302	+		Psest_1311	0.46	+0.3
1,412,302	+		Psest_1311	0.46	+2.4
1,412,303	-		Psest_1311	0.46	+1.2
1,412,303	-		Psest_1311	0.46	+0.3
1,412,344	+		Psest_1311	0.50	-0.9
1,412,344	+		Psest_1311	0.50	-0.3
1,412,344	+		Psest_1311	0.50	-1.0
1,412,345	-		Psest_1311	0.50	+1.1
1,412,345	-		Psest_1311	0.50	+1.1
1,412,345	-		Psest_1311	0.50	-1.2
1,412,345	-		Psest_1311	0.50	+3.3
1,412,345	-		Psest_1311	0.50	-0.6
1,412,653	+		Psest_1311	0.84	+0.2
1,412,653	+		Psest_1311	0.84	+0.3
1,412,653	+		Psest_1311	0.84	+0.6
1,412,653	+		Psest_1311	0.84	+0.3
1,412,653	+		Psest_1311	0.84	+1.1
1,412,653	+		Psest_1311	0.84	-1.7
1,412,654	-		Psest_1311	0.84	+0.0
1,412,654	-		Psest_1311	0.84	-2.4
1,412,654	-		Psest_1311	0.84	+1.2
1,412,654	-		Psest_1311	0.84	-2.0
1,412,654	-		Psest_1311	0.84	+0.4
1,412,668	+		Psest_1311	0.85	-1.4
1,412,668	+		Psest_1311	0.85	+1.1
1,412,668	+		Psest_1311	0.85	+1.6
1,412,668	+		Psest_1311	0.85	-3.3
1,412,668	+		Psest_1311	0.85	-1.1
1,412,668	+		Psest_1311	0.85	+2.6
1,412,668	+		Psest_1311	0.85	-0.5
1,412,668	+		Psest_1311	0.85	-1.3
1,412,668	+		Psest_1311	0.85	-1.1
1,412,668	+		Psest_1311	0.85	+0.2
1,412,669	-		Psest_1311	0.85	+0.5
1,412,669	-		Psest_1311	0.85	+1.9
1,412,669	-		Psest_1311	0.85	+0.6
1,412,669	-		Psest_1311	0.85	+1.7
1,412,669	-		Psest_1311	0.85	-1.0
1,412,669	-		Psest_1311	0.85	+0.9
1,412,669	-		Psest_1311	0.85	+0.5
1,412,669	-		Psest_1311	0.85	-1.6
1,412,669	-		Psest_1311	0.85	+1.5
1,412,669	-		Psest_1311	0.85	+1.1
1,412,669	-		Psest_1311	0.85	+0.4
1,412,669	-		Psest_1311	0.85	+0.2
1,412,711	-		Psest_1311	0.90	-2.5
1,412,711	-		Psest_1311	0.90	-2.8
1,412,744	-				+0.3
1,412,781	+				+0.7
1,412,781	+				+0.6
1,412,781	+				-0.1
1,412,781	+				-1.0
1,412,782	-				-1.1
1,412,782	-				+0.9
1,412,782	-				+1.4
1,412,782	-				-0.1
1,412,782	-				+0.7
1,412,782	-				+0.1
1,412,782	-				+0.9
1,412,785	+				-0.3
1,412,791	+				+1.1
1,412,792	-				+0.1
1,412,974	-				-0.2
1,413,062	+				-0.1
1,413,062	+				+0.3
1,413,063	-				+0.7
1,413,063	-				-0.2
1,413,174	+		Psest_1312	0.10	-0.2
1,413,174	+		Psest_1312	0.10	+1.8
1,413,175	-		Psest_1312	0.10	+1.6
1,413,175	-		Psest_1312	0.10	+0.6
1,413,368	+		Psest_1312	0.27	+2.6
1,413,368	+		Psest_1312	0.27	+0.9
1,413,368	+		Psest_1312	0.27	+0.7
1,413,368	+		Psest_1312	0.27	+0.3
1,413,369	-		Psest_1312	0.28	+1.4
1,413,369	-		Psest_1312	0.28	+0.7
1,413,369	-		Psest_1312	0.28	+1.2
1,413,369	-		Psest_1312	0.28	-1.0
1,413,369	-		Psest_1312	0.28	+0.3
1,413,369	-		Psest_1312	0.28	+2.4
1,413,369	-		Psest_1312	0.28	-0.7
1,413,369	-		Psest_1312	0.28	-1.3
1,413,506	+		Psest_1312	0.40	-0.6
1,413,654	-		Psest_1312	0.53	-2.5
1,413,836	+		Psest_1312	0.69	+1.9
1,413,836	+		Psest_1312	0.69	+0.6
1,413,837	-		Psest_1312	0.69	+0.3
1,413,837	-		Psest_1312	0.69	+2.4
1,414,113	+				+0.6
1,414,113	+				+1.6
1,414,115	+				-1.4
1,414,115	+				+0.8
1,414,115	+				+1.0
1,414,115	+				-0.1
1,414,116	-				+0.1
1,414,179	+				-0.1
1,414,179	+				+0.1
1,414,179	+				-2.0
1,414,179	+				+1.4
1,414,179	+				+0.7
1,414,179	+				+0.6
1,414,180	-				+1.5
1,414,180	-				-0.9
1,414,180	-				-0.6
1,414,180	-				-2.6
1,414,180	-				-1.6
1,414,180	-				-0.9
1,414,180	-				-0.1
1,414,180	-				-1.2
1,414,280	+				-1.6
1,414,281	-				+0.0
1,414,281	-				-1.0
1,414,364	+				-1.7
1,414,403	+				+0.1
1,414,404	-				-0.8
1,414,479	+		Psest_1313	0.31	-0.2
1,414,479	+		Psest_1313	0.31	-2.3
1,414,479	+		Psest_1313	0.31	+2.2
1,414,480	-		Psest_1313	0.32	+0.8
1,414,480	-		Psest_1313	0.32	-0.6
1,414,848	+				+0.4
1,414,848	+				+0.6
1,414,956	-		Psest_1314	0.13	+0.8
1,414,973	+		Psest_1314	0.14	-0.4
1,414,973	+		Psest_1314	0.14	+0.7
1,414,974	-		Psest_1314	0.14	+0.5
1,414,974	-		Psest_1314	0.14	+1.1
1,415,070	+		Psest_1314	0.20	+0.7