Experiment: Carbenicillin 0.0065 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0715 and Psest_0716 are separated by 53 nucleotides Psest_0716 and Psest_0717 are separated by 121 nucleotides
Psest_0715: Psest_0715 - NADH dehydrogenase, FAD-containing subunit, at 783,470 to 784,765
_0715
Psest_0716: Psest_0716 - Protein of unknown function (DUF3094)., at 784,819 to 784,992
_0716
Psest_0717: Psest_0717 - Protein of unknown function (DUF1631)., at 785,114 to 787,372
_0717
Position (kb) 784
785 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 784.046 kb on + strand, within Psest_0715 at 784.116 kb on - strand, within Psest_0715 at 784.179 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.300 kb on + strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.301 kb on - strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.302 kb on + strand, within Psest_0715 at 784.303 kb on - strand, within Psest_0715 at 784.303 kb on - strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.431 kb on + strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.432 kb on - strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.572 kb on + strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.573 kb on - strand, within Psest_0715 at 784.749 kb on - strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.778 kb on + strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.779 kb on - strand at 784.946 kb on + strand, within Psest_0716 at 784.946 kb on + strand, within Psest_0716 at 784.947 kb on - strand, within Psest_0716 at 784.947 kb on - strand, within Psest_0716 at 784.992 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.021 kb on + strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.022 kb on - strand at 785.025 kb on + strand at 785.026 kb on - strand at 785.026 kb on - strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.277 kb on + strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.278 kb on - strand at 785.717 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.737 kb on + strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717 at 785.738 kb on - strand, within Psest_0717
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.0065 mg/ml remove 784,046 + Psest_0715 0.44 +0.8 784,116 - Psest_0715 0.50 +2.1 784,179 + Psest_0715 0.55 +0.8 784,300 + Psest_0715 0.64 -2.8 784,300 + Psest_0715 0.64 +0.6 784,300 + Psest_0715 0.64 -0.2 784,300 + Psest_0715 0.64 +1.0 784,300 + Psest_0715 0.64 -0.4 784,300 + Psest_0715 0.64 +0.5 784,300 + Psest_0715 0.64 -1.2 784,300 + Psest_0715 0.64 -0.2 784,300 + Psest_0715 0.64 -1.3 784,300 + Psest_0715 0.64 -2.5 784,301 - Psest_0715 0.64 -0.6 784,301 - Psest_0715 0.64 +0.4 784,301 - Psest_0715 0.64 +0.9 784,301 - Psest_0715 0.64 +0.3 784,301 - Psest_0715 0.64 -0.3 784,301 - Psest_0715 0.64 +1.2 784,301 - Psest_0715 0.64 +1.5 784,301 - Psest_0715 0.64 +1.4 784,301 - Psest_0715 0.64 +0.7 784,301 - Psest_0715 0.64 -0.6 784,301 - Psest_0715 0.64 +1.4 784,301 - Psest_0715 0.64 -1.6 784,302 + Psest_0715 0.64 -1.8 784,302 + Psest_0715 0.64 +1.8 784,302 + Psest_0715 0.64 -0.8 784,302 + Psest_0715 0.64 -0.3 784,302 + Psest_0715 0.64 -0.2 784,302 + Psest_0715 0.64 -0.4 784,302 + Psest_0715 0.64 -0.5 784,302 + Psest_0715 0.64 +0.0 784,303 - Psest_0715 0.64 -3.1 784,303 - Psest_0715 0.64 +1.4 784,431 + Psest_0715 0.74 +0.2 784,431 + Psest_0715 0.74 -1.0 784,431 + Psest_0715 0.74 -0.8 784,432 - Psest_0715 0.74 -0.4 784,432 - Psest_0715 0.74 -0.3 784,432 - Psest_0715 0.74 -1.2 784,432 - Psest_0715 0.74 -0.7 784,432 - Psest_0715 0.74 -0.4 784,432 - Psest_0715 0.74 -0.5 784,432 - Psest_0715 0.74 -0.7 784,572 + Psest_0715 0.85 +2.5 784,572 + Psest_0715 0.85 +0.0 784,572 + Psest_0715 0.85 +0.7 784,572 + Psest_0715 0.85 -0.5 784,572 + Psest_0715 0.85 -0.1 784,573 - Psest_0715 0.85 -0.5 784,573 - Psest_0715 0.85 -0.4 784,573 - Psest_0715 0.85 +1.2 784,573 - Psest_0715 0.85 -2.4 784,573 - Psest_0715 0.85 -0.2 784,573 - Psest_0715 0.85 +0.7 784,573 - Psest_0715 0.85 -1.2 784,573 - Psest_0715 0.85 +0.5 784,573 - Psest_0715 0.85 +1.0 784,573 - Psest_0715 0.85 +2.2 784,573 - Psest_0715 0.85 +0.1 784,573 - Psest_0715 0.85 +0.5 784,573 - Psest_0715 0.85 -0.6 784,573 - Psest_0715 0.85 -0.1 784,749 - -3.2 784,778 + -0.8 784,778 + -0.6 784,778 + -1.2 784,778 + -1.7 784,778 + -0.9 784,779 - -2.1 784,779 - +0.3 784,779 - +0.0 784,779 - -1.8 784,946 + Psest_0716 0.73 -0.4 784,946 + Psest_0716 0.73 -1.1 784,947 - Psest_0716 0.74 -0.2 784,947 - Psest_0716 0.74 -1.8 784,992 + +0.7 785,021 + -0.3 785,021 + -1.0 785,021 + +0.6 785,021 + -0.7 785,021 + -1.1 785,022 - +0.1 785,022 - -0.7 785,022 - -0.6 785,022 - +0.5 785,022 - -1.8 785,022 - -0.9 785,022 - +0.7 785,025 + -2.4 785,026 - +1.1 785,026 - +0.6 785,277 + -0.2 785,277 + -3.0 785,277 + -1.1 785,277 + -3.1 785,277 + -1.7 785,277 + -1.1 785,277 + -2.6 785,277 + -2.2 785,277 + -0.9 785,277 + +1.2 785,277 + -0.7 785,277 + -1.2 785,277 + +0.6 785,278 - -2.1 785,278 - -0.0 785,278 - -1.7 785,278 - -2.5 785,278 - -1.6 785,717 + Psest_0717 0.27 -0.6 785,737 + Psest_0717 0.28 -2.1 785,737 + Psest_0717 0.28 +0.6 785,737 + Psest_0717 0.28 +0.2 785,738 - Psest_0717 0.28 -1.3 785,738 - Psest_0717 0.28 +1.4 785,738 - Psest_0717 0.28 -1.1 785,738 - Psest_0717 0.28 +0.5 785,738 - Psest_0717 0.28 -0.7 785,738 - Psest_0717 0.28 -1.3 785,738 - Psest_0717 0.28 -0.7 785,738 - Psest_0717 0.28 +1.6 785,738 - Psest_0717 0.28 +1.0 785,738 - Psest_0717 0.28 -1.0 785,738 - Psest_0717 0.28 -0.9 785,738 - Psest_0717 0.28 -1.0
Or see this region's nucleotide sequence