Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3770

Experiment: Carbenicillin 0.0065 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.0065 mg/ml
3,935,952	+		Psest_3768	0.41	-1.2
3,935,952	+		Psest_3768	0.41	-0.8
3,936,026	+		Psest_3768	0.52	+1.8
3,936,026	+		Psest_3768	0.52	-0.9
3,936,026	+		Psest_3768	0.52	-0.0
3,936,026	+		Psest_3768	0.52	-1.8
3,936,027	-		Psest_3768	0.52	-0.2
3,936,027	-		Psest_3768	0.52	+0.4
3,936,086	+		Psest_3768	0.60	-0.4
3,936,087	-		Psest_3768	0.60	-1.9
3,936,437	+				-0.2
3,936,452	-				+0.9
3,936,744	+				-1.0
3,936,744	+				+0.3
3,936,744	+				-1.3
3,936,744	+				-1.6
3,936,744	+				-1.5
3,936,745	-				-1.2
3,936,745	-				-0.6
3,936,745	-				+0.4
3,936,793	-				+1.8
3,936,793	-				+0.4
3,936,793	-				-0.4
3,936,793	-				+0.5
3,936,793	-				+0.7
3,936,793	-				+0.8
3,936,793	-				-1.6
3,936,798	-				-2.2
3,936,798	-				-1.5
3,936,798	-				-0.3
3,936,799	+				-1.6
3,936,870	+				-2.7
3,936,871	-				-0.3
3,936,910	+		Psest_3770	0.16	+0.7
3,936,911	-		Psest_3770	0.17	-1.2
3,936,911	-		Psest_3770	0.17	-1.8
3,936,911	-		Psest_3770	0.17	-1.3
3,936,911	-		Psest_3770	0.17	-1.5
3,936,911	-		Psest_3770	0.17	-0.6
3,936,911	-		Psest_3770	0.17	+1.5
3,936,911	-		Psest_3770	0.17	+0.0
3,937,021	+		Psest_3770	0.42	-2.1
3,937,021	+		Psest_3770	0.42	+0.5
3,937,021	+		Psest_3770	0.42	-1.6
3,937,022	-		Psest_3770	0.43	-0.4
3,937,033	+		Psest_3770	0.45	-1.4
3,937,033	+		Psest_3770	0.45	-0.7
3,937,034	-		Psest_3770	0.46	-0.5
3,937,133	+		Psest_3770	0.69	-0.5
3,937,134	-		Psest_3770	0.69	-1.9
3,937,134	-		Psest_3770	0.69	-0.6
3,937,134	-		Psest_3770	0.69	-1.2
3,937,152	+		Psest_3770	0.73	-0.4
3,937,153	-		Psest_3770	0.73	-0.4
3,937,306	+				+1.2
3,937,306	+				+0.7
3,937,306	+				-1.0
3,937,307	-				+0.6
3,937,307	-				-0.4
3,937,356	+				-1.2
3,937,356	+				+0.9
3,937,356	+				+0.3
3,937,356	+				-2.1
3,937,357	-				-0.6
3,937,357	-				+0.1
3,937,430	+				+0.9
3,937,430	+				+1.1
3,937,430	+				-0.7
3,937,430	+				+0.1
3,937,431	-				-0.9
3,937,431	-				+2.2
3,937,505	-		Psest_3771	0.11	+1.1
3,937,505	-		Psest_3771	0.11	+0.0
3,937,505	-		Psest_3771	0.11	-1.5
3,937,593	+		Psest_3771	0.18	-1.8
3,937,594	-		Psest_3771	0.18	-1.3
3,938,021	+		Psest_3771	0.52	+1.0
3,938,022	-		Psest_3771	0.52	-1.4
3,938,022	-		Psest_3771	0.52	-1.0
3,938,022	-		Psest_3771	0.52	-1.1
3,938,022	-		Psest_3771	0.52	+0.4
3,938,169	-		Psest_3771	0.64	+0.0