Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2180

Experiment: Carbenicillin 0.0065 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.0065 mg/ml
2,336,046	+		Psest_2179	0.68	+1.3
2,336,046	+		Psest_2179	0.68	-2.0
2,336,046	+		Psest_2179	0.68	-1.3
2,336,047	-		Psest_2179	0.68	+0.7
2,336,047	-		Psest_2179	0.68	+2.3
2,336,460	-		Psest_2179	0.85	+0.6
2,336,502	-		Psest_2179	0.86	-1.5
2,336,502	-		Psest_2179	0.86	-0.8
2,336,529	+		Psest_2179	0.87	+0.5
2,336,999	+				-1.0
2,336,999	+				+1.8
2,336,999	+				-2.0
2,336,999	+				+2.6
2,337,000	-				+1.1
2,337,108	+				-0.0
2,337,109	-				+1.1
2,337,111	+				-1.7
2,337,331	+		Psest_2180	0.29	-1.4
2,337,332	-		Psest_2180	0.29	-0.7
2,337,332	-		Psest_2180	0.29	+0.7
2,337,332	-		Psest_2180	0.29	+0.4
2,337,332	-		Psest_2180	0.29	+0.5
2,337,332	-		Psest_2180	0.29	+0.2
2,337,442	-		Psest_2180	0.40	+0.8
2,337,453	-		Psest_2180	0.41	-1.0
2,337,464	-		Psest_2180	0.42	-0.2
2,337,464	-		Psest_2180	0.42	+1.1
2,337,464	-		Psest_2180	0.42	-0.7
2,337,467	-		Psest_2180	0.42	-2.3
2,337,483	+		Psest_2180	0.44	+0.1
2,337,762	+		Psest_2180	0.70	-0.9
2,337,944	-		Psest_2180	0.87	+0.5
2,338,081	+				+0.4
2,338,082	-				-0.8
2,338,177	-				-1.1
2,338,177	-				+1.3
2,338,347	+		Psest_2181	0.15	+0.8
2,338,348	-		Psest_2181	0.15	+0.2
2,338,349	+		Psest_2181	0.15	-1.5
2,338,349	+		Psest_2181	0.15	-0.4
2,338,350	-		Psest_2181	0.15	+1.6
2,338,350	-		Psest_2181	0.15	-0.6
2,338,350	-		Psest_2181	0.15	-0.7
2,338,350	-		Psest_2181	0.15	-0.0
2,338,350	-		Psest_2181	0.15	-0.3
2,338,529	+		Psest_2181	0.30	-0.1
2,338,530	-		Psest_2181	0.30	+1.3
2,338,647	+		Psest_2181	0.40	-0.7
2,338,647	+		Psest_2181	0.40	-1.2
2,338,647	+		Psest_2181	0.40	+0.5
2,338,647	+		Psest_2181	0.40	+2.2
2,338,647	+		Psest_2181	0.40	-0.4
2,338,647	+		Psest_2181	0.40	+0.5
2,338,647	+		Psest_2181	0.40	+0.2
2,338,648	-		Psest_2181	0.41	+1.0
2,338,648	-		Psest_2181	0.41	-0.0
2,338,648	-		Psest_2181	0.41	+0.4
2,338,648	-		Psest_2181	0.41	-0.3
2,338,648	-		Psest_2181	0.41	-1.4
2,338,648	-		Psest_2181	0.41	+0.3
2,338,648	-		Psest_2181	0.41	+0.8
2,338,648	-		Psest_2181	0.41	-0.1
2,338,702	-		Psest_2181	0.45	+0.2
2,338,707	+		Psest_2181	0.46	-0.1
2,338,838	+		Psest_2181	0.57	-0.5
2,338,838	+		Psest_2181	0.57	-1.1
2,338,838	+		Psest_2181	0.57	-1.1
2,338,838	+		Psest_2181	0.57	+2.9
2,338,838	+		Psest_2181	0.57	-0.5
2,338,839	-		Psest_2181	0.57	-0.5
2,338,839	-		Psest_2181	0.57	+1.4
2,338,839	-		Psest_2181	0.57	+0.7
2,338,839	-		Psest_2181	0.57	-0.9
2,338,839	-		Psest_2181	0.57	-1.2
2,338,878	+		Psest_2181	0.60	-0.2
2,338,878	+		Psest_2181	0.60	+0.1
2,338,878	+		Psest_2181	0.60	+0.1
2,338,879	-		Psest_2181	0.60	+0.7
2,338,879	-		Psest_2181	0.60	+1.6
2,338,960	-		Psest_2181	0.67	+0.5