Experiment: Carbenicillin 0.0065 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1749 and Psest_1750 are separated by 3 nucleotides Psest_1750 and Psest_1751 are separated by 134 nucleotides Psest_1751 and Psest_1752 overlap by 20 nucleotides Psest_1752 and Psest_1753 overlap by 4 nucleotides
Psest_1749: Psest_1749 - Chemotaxis signal transduction protein, at 1,854,105 to 1,854,584
_1749
Psest_1750: Psest_1750 - Protein of unknown function (DUF2802)., at 1,854,588 to 1,855,001
_1750
Psest_1751: Psest_1751 - Rhodanese-related sulfurtransferase, at 1,855,136 to 1,855,579
_1751
Psest_1752: Psest_1752 - Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB, at 1,855,560 to 1,855,892
_1752
Psest_1753: Psest_1753 - Flagellar hook-length control protein FliK., at 1,855,889 to 1,857,418
_1753
Position (kb)
1855
1856 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.585 kb on + strand at 1854.586 kb on - strand at 1854.586 kb on - strand at 1854.763 kb on - strand, within Psest_1750 at 1854.812 kb on + strand, within Psest_1750 at 1854.812 kb on + strand, within Psest_1750 at 1854.867 kb on - strand, within Psest_1750 at 1854.911 kb on + strand, within Psest_1750 at 1855.186 kb on - strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.403 kb on + strand, within Psest_1751 at 1855.404 kb on - strand, within Psest_1751 at 1855.404 kb on - strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.419 kb on + strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.420 kb on - strand, within Psest_1751 at 1855.467 kb on - strand, within Psest_1751 at 1855.481 kb on + strand, within Psest_1751 at 1855.482 kb on - strand, within Psest_1751 at 1855.496 kb on + strand, within Psest_1751 at 1855.497 kb on - strand, within Psest_1751 at 1855.512 kb on + strand, within Psest_1751 at 1855.513 kb on - strand, within Psest_1751 at 1855.652 kb on - strand, within Psest_1752 at 1855.714 kb on - strand, within Psest_1752 at 1856.263 kb on + strand, within Psest_1753 at 1856.264 kb on - strand, within Psest_1753 at 1856.585 kb on + strand, within Psest_1753 at 1856.585 kb on + strand, within Psest_1753 at 1856.639 kb on + strand, within Psest_1753 at 1856.640 kb on - strand, within Psest_1753
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.0065 mg/ml remove 1,854,585 + +0.8 1,854,585 + +1.3 1,854,585 + +1.3 1,854,585 + -0.6 1,854,586 - +0.5 1,854,586 - -0.8 1,854,763 - Psest_1750 0.42 -2.8 1,854,812 + Psest_1750 0.54 -0.4 1,854,812 + Psest_1750 0.54 +1.6 1,854,867 - Psest_1750 0.67 -0.8 1,854,911 + Psest_1750 0.78 +3.3 1,855,186 - Psest_1751 0.11 +1.3 1,855,403 + Psest_1751 0.60 +0.6 1,855,403 + Psest_1751 0.60 +0.2 1,855,403 + Psest_1751 0.60 +0.2 1,855,404 - Psest_1751 0.60 +0.2 1,855,404 - Psest_1751 0.60 +0.5 1,855,419 + Psest_1751 0.64 -2.5 1,855,419 + Psest_1751 0.64 +0.6 1,855,419 + Psest_1751 0.64 -1.1 1,855,419 + Psest_1751 0.64 -2.3 1,855,419 + Psest_1751 0.64 -0.5 1,855,419 + Psest_1751 0.64 -1.2 1,855,420 - Psest_1751 0.64 -1.3 1,855,420 - Psest_1751 0.64 -0.3 1,855,420 - Psest_1751 0.64 -0.5 1,855,467 - Psest_1751 0.75 +2.3 1,855,481 + Psest_1751 0.78 +0.1 1,855,482 - Psest_1751 0.78 +1.9 1,855,496 + Psest_1751 0.81 +0.0 1,855,497 - Psest_1751 0.81 -1.1 1,855,512 + Psest_1751 0.85 -1.6 1,855,513 - Psest_1751 0.85 +0.6 1,855,652 - Psest_1752 0.28 -1.5 1,855,714 - Psest_1752 0.46 -0.4 1,856,263 + Psest_1753 0.24 -0.7 1,856,264 - Psest_1753 0.25 +0.3 1,856,585 + Psest_1753 0.45 +0.2 1,856,585 + Psest_1753 0.45 -0.4 1,856,639 + Psest_1753 0.49 -1.4 1,856,640 - Psest_1753 0.49 +2.0
Or see this region's nucleotide sequence