Experiment: Aluminum chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0840 and Psest_0841 are separated by 74 nucleotides Psest_0841 and Psest_0842 overlap by 4 nucleotides Psest_0842 and Psest_0843 are separated by 49 nucleotides Psest_0843 and Psest_0844 overlap by 4 nucleotides Psest_0844 and Psest_0845 are separated by 16 nucleotides
Psest_0840: Psest_0840 - anaerobic ribonucleoside-triphosphate reductase, at 910,238 to 912,256
_0840
Psest_0841: Psest_0841 - hypothetical protein, at 912,331 to 912,486
_0841
Psest_0842: Psest_0842 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 912,483 to 913,178
_0842
Psest_0843: Psest_0843 - hypothetical protein, at 913,228 to 914,604
_0843
Psest_0844: Psest_0844 - High-affinity Fe2+/Pb2+ permease, at 914,601 to 915,458
_0844
Psest_0845: Psest_0845 - hypothetical protein, at 915,475 to 915,813
_0845
Position (kb) 913
914
915 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 912.301 kb on + strand at 912.301 kb on + strand at 912.301 kb on + strand at 912.302 kb on - strand at 912.302 kb on - strand at 912.306 kb on - strand at 912.591 kb on + strand, within Psest_0842 at 912.768 kb on + strand, within Psest_0842 at 913.176 kb on + strand at 913.342 kb on + strand at 913.343 kb on - strand at 913.343 kb on - strand at 913.343 kb on - strand at 913.359 kb on - strand at 913.522 kb on + strand, within Psest_0843 at 913.522 kb on + strand, within Psest_0843 at 913.522 kb on + strand, within Psest_0843 at 913.522 kb on + strand, within Psest_0843 at 913.522 kb on + strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.523 kb on - strand, within Psest_0843 at 913.608 kb on + strand, within Psest_0843 at 913.608 kb on + strand, within Psest_0843 at 913.609 kb on - strand, within Psest_0843 at 913.609 kb on - strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.610 kb on + strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.611 kb on - strand, within Psest_0843 at 913.897 kb on + strand, within Psest_0843 at 913.898 kb on - strand, within Psest_0843 at 914.048 kb on + strand, within Psest_0843 at 914.048 kb on + strand, within Psest_0843 at 914.049 kb on - strand, within Psest_0843 at 914.049 kb on - strand, within Psest_0843 at 914.049 kb on - strand, within Psest_0843 at 914.049 kb on - strand, within Psest_0843 at 914.049 kb on - strand, within Psest_0843 at 914.201 kb on + strand, within Psest_0843 at 914.201 kb on + strand, within Psest_0843 at 914.201 kb on + strand, within Psest_0843 at 914.201 kb on + strand, within Psest_0843 at 914.202 kb on - strand, within Psest_0843 at 914.202 kb on - strand, within Psest_0843 at 914.202 kb on - strand, within Psest_0843 at 914.207 kb on + strand, within Psest_0843 at 914.207 kb on + strand, within Psest_0843 at 914.207 kb on + strand, within Psest_0843 at 914.207 kb on + strand, within Psest_0843 at 914.207 kb on + strand, within Psest_0843 at 914.208 kb on - strand, within Psest_0843 at 914.229 kb on - strand, within Psest_0843 at 914.507 kb on + strand at 914.508 kb on - strand at 914.508 kb on - strand at 914.508 kb on - strand at 914.508 kb on - strand at 914.508 kb on - strand at 914.803 kb on + strand, within Psest_0844 at 914.803 kb on + strand, within Psest_0844 at 914.803 kb on + strand, within Psest_0844 at 914.803 kb on + strand, within Psest_0844 at 914.817 kb on + strand, within Psest_0844 at 914.818 kb on - strand, within Psest_0844 at 915.046 kb on + strand, within Psest_0844 at 915.047 kb on - strand, within Psest_0844 at 915.223 kb on - strand, within Psest_0844 at 915.288 kb on + strand, within Psest_0844 at 915.473 kb on + strand at 915.474 kb on - strand at 915.474 kb on - strand at 915.476 kb on + strand at 915.476 kb on + strand at 915.476 kb on + strand at 915.476 kb on + strand at 915.477 kb on - strand at 915.477 kb on - strand at 915.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.3 mM remove 912,301 + -1.7 912,301 + -1.1 912,301 + -0.5 912,302 - -0.4 912,302 - -0.3 912,306 - -2.5 912,591 + Psest_0842 0.16 -1.2 912,768 + Psest_0842 0.41 -0.5 913,176 + +0.5 913,342 + -0.3 913,343 - -2.3 913,343 - -3.0 913,343 - -0.4 913,359 - -0.7 913,522 + Psest_0843 0.21 -2.3 913,522 + Psest_0843 0.21 -1.7 913,522 + Psest_0843 0.21 -1.0 913,522 + Psest_0843 0.21 -0.9 913,522 + Psest_0843 0.21 +0.5 913,523 - Psest_0843 0.21 -1.5 913,523 - Psest_0843 0.21 -1.5 913,523 - Psest_0843 0.21 -2.2 913,523 - Psest_0843 0.21 -2.0 913,523 - Psest_0843 0.21 -0.7 913,523 - Psest_0843 0.21 +0.0 913,523 - Psest_0843 0.21 -1.1 913,608 + Psest_0843 0.28 -0.4 913,608 + Psest_0843 0.28 -1.3 913,609 - Psest_0843 0.28 -2.7 913,609 - Psest_0843 0.28 -1.4 913,610 + Psest_0843 0.28 -0.4 913,610 + Psest_0843 0.28 -1.3 913,610 + Psest_0843 0.28 -1.6 913,610 + Psest_0843 0.28 -0.6 913,610 + Psest_0843 0.28 -2.4 913,610 + Psest_0843 0.28 -1.5 913,610 + Psest_0843 0.28 -1.4 913,610 + Psest_0843 0.28 -1.4 913,610 + Psest_0843 0.28 -1.5 913,611 - Psest_0843 0.28 -0.4 913,611 - Psest_0843 0.28 -1.3 913,611 - Psest_0843 0.28 -1.1 913,611 - Psest_0843 0.28 -0.2 913,611 - Psest_0843 0.28 -0.4 913,611 - Psest_0843 0.28 -1.4 913,611 - Psest_0843 0.28 +0.1 913,611 - Psest_0843 0.28 -0.4 913,611 - Psest_0843 0.28 -1.1 913,897 + Psest_0843 0.49 -1.7 913,898 - Psest_0843 0.49 -1.5 914,048 + Psest_0843 0.60 -2.2 914,048 + Psest_0843 0.60 -0.3 914,049 - Psest_0843 0.60 +0.7 914,049 - Psest_0843 0.60 -1.5 914,049 - Psest_0843 0.60 -1.8 914,049 - Psest_0843 0.60 -1.8 914,049 - Psest_0843 0.60 -0.9 914,201 + Psest_0843 0.71 -0.8 914,201 + Psest_0843 0.71 -2.5 914,201 + Psest_0843 0.71 -2.8 914,201 + Psest_0843 0.71 -1.8 914,202 - Psest_0843 0.71 -1.4 914,202 - Psest_0843 0.71 -0.5 914,202 - Psest_0843 0.71 -1.6 914,207 + Psest_0843 0.71 -2.7 914,207 + Psest_0843 0.71 -0.3 914,207 + Psest_0843 0.71 -0.3 914,207 + Psest_0843 0.71 -2.7 914,207 + Psest_0843 0.71 -1.2 914,208 - Psest_0843 0.71 -0.7 914,229 - Psest_0843 0.73 -2.8 914,507 + -1.0 914,508 - +0.2 914,508 - -1.3 914,508 - -1.3 914,508 - +1.6 914,508 - -1.0 914,803 + Psest_0844 0.24 +1.0 914,803 + Psest_0844 0.24 -1.9 914,803 + Psest_0844 0.24 -0.3 914,803 + Psest_0844 0.24 -1.9 914,817 + Psest_0844 0.25 +0.8 914,818 - Psest_0844 0.25 -2.6 915,046 + Psest_0844 0.52 -1.3 915,047 - Psest_0844 0.52 -1.8 915,223 - Psest_0844 0.72 -1.8 915,288 + Psest_0844 0.80 -1.7 915,473 + -1.1 915,474 - -0.6 915,474 - +1.9 915,476 + -0.7 915,476 + -1.4 915,476 + -2.5 915,476 + +0.0 915,477 - +1.9 915,477 - -1.4 915,477 - +0.3
Or see this region's nucleotide sequence