Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0459

Experiment: Aluminum chloride 0.3 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0458 and Psest_0459 are separated by 12 nucleotidesPsest_0459 and Psest_0460 overlap by 14 nucleotides Psest_0458: Psest_0458 - Mn2+-dependent serine/threonine protein kinase, at 503,620 to 505,065 _0458 Psest_0459: Psest_0459 - Predicted carbamoyl transferase, NodU family, at 505,078 to 506,832 _0459 Psest_0460: Psest_0460 - Glycosyltransferase, at 506,819 to 507,952 _0460 Position (kb) 505 506 507Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 505.063 kb on + strandat 505.327 kb on + strand, within Psest_0459at 505.624 kb on + strand, within Psest_0459at 505.624 kb on + strand, within Psest_0459at 505.624 kb on + strand, within Psest_0459at 505.624 kb on + strand, within Psest_0459at 505.624 kb on + strand, within Psest_0459at 505.669 kb on + strand, within Psest_0459at 505.825 kb on + strand, within Psest_0459at 505.825 kb on + strand, within Psest_0459at 505.846 kb on + strand, within Psest_0459at 505.849 kb on + strand, within Psest_0459at 505.849 kb on + strand, within Psest_0459at 505.849 kb on + strand, within Psest_0459at 505.849 kb on + strand, within Psest_0459at 505.849 kb on + strand, within Psest_0459at 505.915 kb on + strand, within Psest_0459at 505.915 kb on + strand, within Psest_0459at 505.915 kb on + strand, within Psest_0459at 505.915 kb on + strand, within Psest_0459at 505.915 kb on + strand, within Psest_0459at 505.924 kb on + strand, within Psest_0459at 505.978 kb on + strand, within Psest_0459at 505.978 kb on + strand, within Psest_0459at 505.981 kb on + strand, within Psest_0459at 505.981 kb on + strand, within Psest_0459at 505.981 kb on + strand, within Psest_0459at 505.981 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.143 kb on + strand, within Psest_0459at 506.147 kb on + strand, within Psest_0459at 506.147 kb on + strand, within Psest_0459at 506.147 kb on + strand, within Psest_0459at 506.147 kb on + strand, within Psest_0459at 506.191 kb on + strand, within Psest_0459at 506.191 kb on + strand, within Psest_0459at 506.191 kb on + strand, within Psest_0459at 506.206 kb on + strand, within Psest_0459at 506.238 kb on + strand, within Psest_0459at 506.277 kb on + strand, within Psest_0459at 506.277 kb on + strand, within Psest_0459at 506.277 kb on + strand, within Psest_0459at 506.770 kb on + strandat 506.818 kb on + strandat 506.818 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum chloride 0.3 mM
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505,063 + +0.6
505,327 + Psest_0459 0.14 -1.8
505,624 + Psest_0459 0.31 -3.4
505,624 + Psest_0459 0.31 -1.9
505,624 + Psest_0459 0.31 -3.6
505,624 + Psest_0459 0.31 -3.2
505,624 + Psest_0459 0.31 -1.8
505,669 + Psest_0459 0.34 -3.1
505,825 + Psest_0459 0.43 -1.8
505,825 + Psest_0459 0.43 -3.4
505,846 + Psest_0459 0.44 -3.1
505,849 + Psest_0459 0.44 -2.3
505,849 + Psest_0459 0.44 -0.9
505,849 + Psest_0459 0.44 -3.0
505,849 + Psest_0459 0.44 -0.5
505,849 + Psest_0459 0.44 -2.0
505,915 + Psest_0459 0.48 -1.7
505,915 + Psest_0459 0.48 -1.8
505,915 + Psest_0459 0.48 -2.1
505,915 + Psest_0459 0.48 -2.3
505,915 + Psest_0459 0.48 -2.7
505,924 + Psest_0459 0.48 -1.9
505,978 + Psest_0459 0.51 -2.2
505,978 + Psest_0459 0.51 -2.4
505,981 + Psest_0459 0.51 -2.8
505,981 + Psest_0459 0.51 -2.3
505,981 + Psest_0459 0.51 -1.6
505,981 + Psest_0459 0.51 -1.7
506,143 + Psest_0459 0.61 -1.5
506,143 + Psest_0459 0.61 -0.2
506,143 + Psest_0459 0.61 -1.3
506,143 + Psest_0459 0.61 -0.2
506,143 + Psest_0459 0.61 -2.0
506,143 + Psest_0459 0.61 -1.6
506,143 + Psest_0459 0.61 -0.3
506,143 + Psest_0459 0.61 -2.6
506,143 + Psest_0459 0.61 -1.7
506,143 + Psest_0459 0.61 -3.6
506,143 + Psest_0459 0.61 -4.1
506,143 + Psest_0459 0.61 -1.7
506,143 + Psest_0459 0.61 -1.4
506,143 + Psest_0459 0.61 -1.7
506,143 + Psest_0459 0.61 -0.8
506,143 + Psest_0459 0.61 -1.8
506,147 + Psest_0459 0.61 -3.0
506,147 + Psest_0459 0.61 -1.8
506,147 + Psest_0459 0.61 -1.7
506,147 + Psest_0459 0.61 -1.0
506,191 + Psest_0459 0.63 -2.5
506,191 + Psest_0459 0.63 -1.7
506,191 + Psest_0459 0.63 -3.0
506,206 + Psest_0459 0.64 -4.1
506,238 + Psest_0459 0.66 -2.4
506,277 + Psest_0459 0.68 -2.4
506,277 + Psest_0459 0.68 -0.1
506,277 + Psest_0459 0.68 -2.6
506,770 + -0.9
506,818 + -0.8
506,818 + -0.1

Or see this region's nucleotide sequence