Experiment: Aluminum chloride 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2444 and Psest_2445 are separated by 120 nucleotides Psest_2445 and Psest_2446 are separated by 10 nucleotides
Psest_2444: Psest_2444 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 2,612,120 to 2,613,754
_2444
Psest_2445: Psest_2445 - 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) , at 2,613,875 to 2,615,014
_2445
Psest_2446: Psest_2446 - acetyl-CoA acetyltransferases, at 2,615,025 to 2,616,209
_2446
Position (kb)
2613
2614
2615
2616 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2612.919 kb on + strand, within Psest_2444 at 2612.919 kb on + strand, within Psest_2444 at 2612.919 kb on + strand, within Psest_2444 at 2612.919 kb on + strand, within Psest_2444 at 2612.919 kb on + strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2612.920 kb on - strand, within Psest_2444 at 2613.175 kb on - strand, within Psest_2444 at 2613.175 kb on - strand, within Psest_2444 at 2613.213 kb on + strand, within Psest_2444 at 2613.213 kb on + strand, within Psest_2444 at 2613.213 kb on + strand, within Psest_2444 at 2613.438 kb on + strand, within Psest_2444 at 2613.438 kb on + strand, within Psest_2444 at 2613.628 kb on - strand at 2613.628 kb on - strand at 2613.761 kb on + strand at 2613.762 kb on - strand at 2613.762 kb on - strand at 2613.767 kb on + strand at 2613.768 kb on - strand at 2613.768 kb on - strand at 2613.768 kb on - strand at 2613.768 kb on - strand at 2613.768 kb on - strand at 2613.768 kb on - strand at 2613.779 kb on - strand at 2613.779 kb on - strand at 2613.779 kb on - strand at 2613.834 kb on + strand at 2613.834 kb on + strand at 2613.834 kb on + strand at 2613.834 kb on + strand at 2613.835 kb on - strand at 2613.835 kb on - strand at 2613.936 kb on + strand at 2613.936 kb on + strand at 2613.937 kb on - strand at 2613.937 kb on - strand at 2613.994 kb on - strand, within Psest_2445 at 2614.540 kb on + strand, within Psest_2445 at 2614.549 kb on + strand, within Psest_2445 at 2614.550 kb on - strand, within Psest_2445 at 2614.578 kb on + strand, within Psest_2445 at 2614.578 kb on + strand, within Psest_2445 at 2614.578 kb on + strand, within Psest_2445 at 2614.579 kb on - strand, within Psest_2445 at 2614.579 kb on - strand, within Psest_2445 at 2614.815 kb on + strand, within Psest_2445 at 2614.815 kb on + strand, within Psest_2445 at 2614.816 kb on - strand, within Psest_2445 at 2615.749 kb on + strand, within Psest_2446 at 2615.836 kb on + strand, within Psest_2446 at 2615.837 kb on - strand, within Psest_2446 at 2615.837 kb on - strand, within Psest_2446
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.3 mM remove 2,612,919 + Psest_2444 0.49 -0.9 2,612,919 + Psest_2444 0.49 -0.7 2,612,919 + Psest_2444 0.49 +0.4 2,612,919 + Psest_2444 0.49 +0.4 2,612,919 + Psest_2444 0.49 -1.1 2,612,920 - Psest_2444 0.49 +0.8 2,612,920 - Psest_2444 0.49 -1.5 2,612,920 - Psest_2444 0.49 +0.4 2,612,920 - Psest_2444 0.49 -1.7 2,612,920 - Psest_2444 0.49 +0.0 2,612,920 - Psest_2444 0.49 -0.5 2,612,920 - Psest_2444 0.49 -0.4 2,612,920 - Psest_2444 0.49 -1.1 2,612,920 - Psest_2444 0.49 -0.0 2,612,920 - Psest_2444 0.49 +0.8 2,613,175 - Psest_2444 0.65 +1.4 2,613,175 - Psest_2444 0.65 +2.2 2,613,213 + Psest_2444 0.67 +2.5 2,613,213 + Psest_2444 0.67 -0.5 2,613,213 + Psest_2444 0.67 -0.3 2,613,438 + Psest_2444 0.81 +0.7 2,613,438 + Psest_2444 0.81 +2.1 2,613,628 - -2.1 2,613,628 - -0.6 2,613,761 + -0.3 2,613,762 - +0.4 2,613,762 - +0.0 2,613,767 + +0.6 2,613,768 - +0.8 2,613,768 - +0.9 2,613,768 - +0.3 2,613,768 - +1.5 2,613,768 - -1.0 2,613,768 - +0.6 2,613,779 - +1.8 2,613,779 - +0.4 2,613,779 - +0.4 2,613,834 + +1.4 2,613,834 + +0.1 2,613,834 + +0.6 2,613,834 + +0.6 2,613,835 - -0.3 2,613,835 - +0.2 2,613,936 + -0.9 2,613,936 + +1.2 2,613,937 - -0.4 2,613,937 - +0.3 2,613,994 - Psest_2445 0.10 -0.9 2,614,540 + Psest_2445 0.58 -0.9 2,614,549 + Psest_2445 0.59 -0.5 2,614,550 - Psest_2445 0.59 -0.1 2,614,578 + Psest_2445 0.62 -0.1 2,614,578 + Psest_2445 0.62 -1.1 2,614,578 + Psest_2445 0.62 -0.2 2,614,579 - Psest_2445 0.62 -1.2 2,614,579 - Psest_2445 0.62 -2.0 2,614,815 + Psest_2445 0.82 +0.1 2,614,815 + Psest_2445 0.82 -0.1 2,614,816 - Psest_2445 0.83 -0.6 2,615,749 + Psest_2446 0.61 +0.5 2,615,836 + Psest_2446 0.68 -0.4 2,615,837 - Psest_2446 0.69 -0.6 2,615,837 - Psest_2446 0.69 +0.1
Or see this region's nucleotide sequence