Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24815

Experiment: p-Coumaric (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 2.5 mM
5,559,602	-		PFLU_RS24805	0.79	+2.7
5,559,614	-		PFLU_RS24805	0.80	+4.0
5,559,614	-		PFLU_RS24805	0.80	+1.9
5,559,630	-		PFLU_RS24805	0.82	-0.1
5,559,630	-		PFLU_RS24805	0.82	+2.7
5,559,774	-				+0.1
5,559,774	-				+0.7
5,559,781	-				+1.7
5,559,781	-				+2.8
5,559,781	-				-0.1
5,559,781	-				+1.7
5,559,781	-				+1.7
5,559,781	-				-0.3
5,559,823	-				+1.1
5,559,823	-				-0.1
5,559,823	-				+0.9
5,559,823	-				-1.1
5,559,823	-				+0.2
5,559,823	-				+1.2
5,559,823	-				+0.8
5,559,823	-				-0.5
5,559,823	-				+0.5
5,559,832	-				-0.3
5,559,929	+		PFLU_RS24810	0.16	+1.7
5,559,929	+		PFLU_RS24810	0.16	-0.8
5,559,930	-		PFLU_RS24810	0.16	+1.0
5,559,930	-		PFLU_RS24810	0.16	-2.2
5,559,930	-		PFLU_RS24810	0.16	+0.2
5,559,930	-		PFLU_RS24810	0.16	-0.4
5,559,930	-		PFLU_RS24810	0.16	+0.7
5,559,934	+		PFLU_RS24810	0.17	-0.3
5,559,934	+		PFLU_RS24810	0.17	+0.1
5,559,934	+		PFLU_RS24810	0.17	-0.1
5,559,934	+		PFLU_RS24810	0.17	+0.1
5,559,934	+		PFLU_RS24810	0.17	+0.7
5,559,934	+		PFLU_RS24810	0.17	+0.1
5,559,934	+		PFLU_RS24810	0.17	+2.7
5,559,934	+		PFLU_RS24810	0.17	+0.7
5,559,934	+		PFLU_RS24810	0.17	+0.9
5,559,934	+		PFLU_RS24810	0.17	-0.9
5,559,934	+		PFLU_RS24810	0.17	+1.7
5,559,934	+		PFLU_RS24810	0.17	+0.7
5,559,934	+		PFLU_RS24810	0.17	+1.7
5,559,935	-		PFLU_RS24810	0.17	-1.2
5,559,935	-		PFLU_RS24810	0.17	-0.7
5,559,935	-		PFLU_RS24810	0.17	-0.3
5,559,935	-		PFLU_RS24810	0.17	-0.8
5,559,935	-		PFLU_RS24810	0.17	-0.9
5,559,935	-		PFLU_RS24810	0.17	-1.5
5,559,935	-		PFLU_RS24810	0.17	-2.1
5,559,935	-		PFLU_RS24810	0.17	-1.5
5,559,935	-		PFLU_RS24810	0.17	-1.9
5,559,935	-		PFLU_RS24810	0.17	-0.6
5,559,935	-		PFLU_RS24810	0.17	+0.7
5,559,935	-		PFLU_RS24810	0.17	-0.5
5,559,935	-		PFLU_RS24810	0.17	-1.8
5,559,935	-		PFLU_RS24810	0.17	-1.6
5,559,935	-		PFLU_RS24810	0.17	-0.4
5,559,935	-		PFLU_RS24810	0.17	-2.0
5,559,935	-		PFLU_RS24810	0.17	-0.4
5,559,935	-		PFLU_RS24810	0.17	+1.4
5,559,962	-		PFLU_RS24810	0.21	-0.9
5,559,962	-		PFLU_RS24810	0.21	-0.6
5,559,972	+		PFLU_RS24810	0.22	+1.7
5,559,972	+		PFLU_RS24810	0.22	+0.1
5,559,972	+		PFLU_RS24810	0.22	+1.7
5,559,972	+		PFLU_RS24810	0.22	+0.1
5,559,972	+		PFLU_RS24810	0.22	+0.1
5,559,972	+		PFLU_RS24810	0.22	-0.3
5,559,973	-		PFLU_RS24810	0.22	+0.7
5,559,973	-		PFLU_RS24810	0.22	+0.3
5,559,973	-		PFLU_RS24810	0.22	-0.7
5,559,975	+		PFLU_RS24810	0.22	+3.3
5,559,975	+		PFLU_RS24810	0.22	+0.1
5,559,975	+		PFLU_RS24810	0.22	+0.9
5,559,976	-		PFLU_RS24810	0.22	-1.0
5,559,993	+		PFLU_RS24810	0.25	+0.5
5,559,993	+		PFLU_RS24810	0.25	+0.1
5,559,993	+		PFLU_RS24810	0.25	-0.3
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,993	+		PFLU_RS24810	0.25	-0.6
5,559,993	+		PFLU_RS24810	0.25	+0.7
5,559,993	+		PFLU_RS24810	0.25	+2.3
5,559,993	+		PFLU_RS24810	0.25	-0.3
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,993	+		PFLU_RS24810	0.25	+0.7
5,559,993	+		PFLU_RS24810	0.25	+0.7
5,559,993	+		PFLU_RS24810	0.25	+0.7
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,993	+		PFLU_RS24810	0.25	-0.3
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,993	+		PFLU_RS24810	0.25	+2.7
5,559,993	+		PFLU_RS24810	0.25	+0.1
5,559,993	+		PFLU_RS24810	0.25	-0.3
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,993	+		PFLU_RS24810	0.25	+1.7
5,559,994	-		PFLU_RS24810	0.25	-0.6
5,559,994	-		PFLU_RS24810	0.25	-2.1
5,559,994	-		PFLU_RS24810	0.25	+0.1
5,559,994	-		PFLU_RS24810	0.25	-0.8
5,559,994	-		PFLU_RS24810	0.25	+0.0
5,559,994	-		PFLU_RS24810	0.25	-0.2
5,559,994	-		PFLU_RS24810	0.25	-1.1
5,559,994	-		PFLU_RS24810	0.25	-1.2
5,559,994	-		PFLU_RS24810	0.25	-0.5
5,559,994	-		PFLU_RS24810	0.25	+0.1
5,559,994	-		PFLU_RS24810	0.25	+1.3
5,559,994	-		PFLU_RS24810	0.25	-1.6
5,559,994	-		PFLU_RS24810	0.25	-2.6
5,559,994	-		PFLU_RS24810	0.25	+0.4
5,559,994	-		PFLU_RS24810	0.25	-0.3
5,559,994	-		PFLU_RS24810	0.25	-1.5
5,559,994	-		PFLU_RS24810	0.25	+1.2
5,559,994	-		PFLU_RS24810	0.25	+0.3
5,559,994	-		PFLU_RS24810	0.25	+0.8
5,559,994	-		PFLU_RS24810	0.25	+0.7
5,559,994	-		PFLU_RS24810	0.25	-0.3
5,559,994	-		PFLU_RS24810	0.25	+0.3
5,559,994	-		PFLU_RS24810	0.25	-0.1
5,559,994	-		PFLU_RS24810	0.25	-1.0
5,559,994	-		PFLU_RS24810	0.25	-0.3
5,559,994	-		PFLU_RS24810	0.25	-0.9
5,560,155	+		PFLU_RS24810	0.46	+0.9
5,560,155	+		PFLU_RS24810	0.46	+1.5
5,560,185	+		PFLU_RS24810	0.50	+0.9
5,560,185	+		PFLU_RS24810	0.50	+4.0
5,560,186	-		PFLU_RS24810	0.50	+1.2
5,560,186	-		PFLU_RS24810	0.50	+1.4
5,560,186	-		PFLU_RS24810	0.50	+0.2
5,560,233	+		PFLU_RS24810	0.56	-0.6
5,560,233	+		PFLU_RS24810	0.56	+2.4
5,560,233	+		PFLU_RS24810	0.56	-0.3
5,560,234	-		PFLU_RS24810	0.56	+2.2
5,560,234	-		PFLU_RS24810	0.56	+1.1
5,560,234	-		PFLU_RS24810	0.56	+0.1
5,560,234	-		PFLU_RS24810	0.56	-2.5
5,560,234	-		PFLU_RS24810	0.56	+0.9
5,560,234	-		PFLU_RS24810	0.56	+3.3
5,560,234	-		PFLU_RS24810	0.56	+0.2
5,560,234	-		PFLU_RS24810	0.56	+3.3
5,560,287	+		PFLU_RS24810	0.63	+0.4
5,560,287	+		PFLU_RS24810	0.63	+1.7
5,560,287	+		PFLU_RS24810	0.63	+0.1
5,560,288	-		PFLU_RS24810	0.64	-0.3
5,560,425	+		PFLU_RS24810	0.82	+1.7
5,560,426	-		PFLU_RS24810	0.82	+1.0
5,560,446	+		PFLU_RS24810	0.84	+3.3
5,560,446	+		PFLU_RS24810	0.84	-1.1
5,560,447	-		PFLU_RS24810	0.84	+0.7
5,560,447	-		PFLU_RS24810	0.84	-2.7
5,560,447	-		PFLU_RS24810	0.84	+0.4
5,560,447	-		PFLU_RS24810	0.84	+1.0
5,560,447	-		PFLU_RS24810	0.84	+3.7
5,560,447	-		PFLU_RS24810	0.84	-0.8
5,560,564	+				+1.7
5,560,564	+				+0.7
5,560,564	+				-0.3
5,560,564	+				+0.1
5,560,564	+				+2.3
5,560,564	+				-1.1
5,560,564	+				+0.7
5,560,565	-				-0.1
5,560,565	-				+0.7
5,560,565	-				-0.2
5,560,565	-				-0.5
5,560,565	-				-1.2
5,560,565	-				-0.6
5,560,565	-				+1.3
5,560,565	-				+0.5
5,560,565	-				+0.7
5,560,565	-				-0.3
5,560,565	-				+1.3
5,560,639	+				+0.7
5,560,639	+				-1.1
5,560,639	+				+0.9
5,560,640	-				+1.4
5,560,640	-				-0.0
5,560,640	-				-1.1
5,560,640	-				-0.2
5,560,641	+				+3.0
5,560,641	+				-0.3
5,560,641	+				+0.7
5,560,641	+				+0.7
5,560,641	+				-0.9
5,560,641	+				-0.6
5,560,641	+				+2.7
5,560,641	+				+0.1
5,560,641	+				+0.1
5,560,642	-				-0.6
5,560,642	-				+0.4
5,560,642	-				-1.6
5,560,642	-				+0.1
5,560,642	-				+0.8
5,560,642	-				+2.3
5,560,642	-				-0.3
5,560,642	-				-1.5
5,560,642	-				-0.2
5,560,642	-				-0.8
5,560,727	+		PFLU_RS24815	0.13	+1.7
5,560,728	-		PFLU_RS24815	0.13	-1.0
5,560,728	-		PFLU_RS24815	0.13	+0.9
5,560,728	-		PFLU_RS24815	0.13	-0.4
5,560,728	-		PFLU_RS24815	0.13	-1.9
5,560,728	-		PFLU_RS24815	0.13	-0.6
5,560,741	-		PFLU_RS24815	0.14	-2.4
5,560,741	-		PFLU_RS24815	0.14	-0.9
5,560,741	-		PFLU_RS24815	0.14	-0.8
5,560,741	-		PFLU_RS24815	0.14	+0.4
5,560,741	-		PFLU_RS24815	0.14	-1.7
5,560,801	-		PFLU_RS24815	0.19	-1.4
5,560,921	-		PFLU_RS24815	0.30	-0.2
5,560,921	-		PFLU_RS24815	0.30	+0.7
5,560,921	-		PFLU_RS24815	0.30	+0.4
5,560,921	-		PFLU_RS24815	0.30	-0.9
5,560,921	-		PFLU_RS24815	0.30	-0.6
5,560,921	-		PFLU_RS24815	0.30	-0.8
5,560,921	-		PFLU_RS24815	0.30	-0.9
5,560,921	-		PFLU_RS24815	0.30	-1.6
5,560,921	-		PFLU_RS24815	0.30	-1.6
5,560,921	-		PFLU_RS24815	0.30	-1.4
5,560,961	-		PFLU_RS24815	0.33	-2.1
5,560,961	-		PFLU_RS24815	0.33	-0.1
5,560,961	-		PFLU_RS24815	0.33	-0.1
5,560,961	-		PFLU_RS24815	0.33	-1.4
5,560,961	-		PFLU_RS24815	0.33	-0.9
5,560,961	-		PFLU_RS24815	0.33	-1.1
5,560,961	-		PFLU_RS24815	0.33	+2.4
5,560,961	-		PFLU_RS24815	0.33	-2.8
5,560,961	-		PFLU_RS24815	0.33	-1.4
5,560,961	-		PFLU_RS24815	0.33	+0.8
5,560,961	-		PFLU_RS24815	0.33	-0.9
5,560,963	-		PFLU_RS24815	0.34	+0.7
5,560,963	-		PFLU_RS24815	0.34	+0.1
5,560,963	-		PFLU_RS24815	0.34	-1.8
5,560,963	-		PFLU_RS24815	0.34	-1.8
5,560,963	-		PFLU_RS24815	0.34	-1.5
5,560,963	-		PFLU_RS24815	0.34	-0.5
5,560,963	-		PFLU_RS24815	0.34	-1.4
5,560,963	-		PFLU_RS24815	0.34	-1.6
5,560,963	-		PFLU_RS24815	0.34	-0.4
5,560,963	-		PFLU_RS24815	0.34	-0.7
5,560,963	-		PFLU_RS24815	0.34	-1.1
5,560,963	-		PFLU_RS24815	0.34	-0.3
5,560,963	-		PFLU_RS24815	0.34	-2.4
5,560,963	-		PFLU_RS24815	0.34	+0.5
5,560,963	-		PFLU_RS24815	0.34	-0.2
5,560,963	-		PFLU_RS24815	0.34	+1.4
5,560,963	-		PFLU_RS24815	0.34	-1.5
5,560,963	-		PFLU_RS24815	0.34	+1.1
5,560,963	-		PFLU_RS24815	0.34	-0.1
5,560,963	-		PFLU_RS24815	0.34	-0.3
5,560,963	-		PFLU_RS24815	0.34	-1.3
5,560,991	-		PFLU_RS24815	0.36	-2.6
5,560,991	-		PFLU_RS24815	0.36	-0.7
5,560,999	-		PFLU_RS24815	0.37	-0.3
5,560,999	-		PFLU_RS24815	0.37	+1.3
5,560,999	-		PFLU_RS24815	0.37	+2.3
5,560,999	-		PFLU_RS24815	0.37	+0.3
5,561,333	-		PFLU_RS24815	0.66	+0.5
5,561,333	-		PFLU_RS24815	0.66	-2.0
5,561,333	-		PFLU_RS24815	0.66	-0.6
5,561,431	-		PFLU_RS24815	0.74	+1.7
5,561,622	-				+1.4
5,561,745	-				+1.5
5,561,757	-				-0.3
5,561,768	-				-1.8
5,561,768	-				-1.4
5,561,768	-				-1.6
5,562,206	-				-1.0
5,562,229	-				-0.1
5,562,229	-				-0.7
5,562,229	-				+0.1
5,562,231	-				-1.5
5,562,254	-				-1.8
5,562,383	+		PFLU_RS24825	0.55	+0.7
5,562,383	+		PFLU_RS24825	0.55	-0.1
5,562,383	+		PFLU_RS24825	0.55	-1.1
5,562,399	+		PFLU_RS24825	0.63	+0.4
5,562,399	+		PFLU_RS24825	0.63	+0.1
5,562,400	-		PFLU_RS24825	0.64	+0.4
5,562,400	-		PFLU_RS24825	0.64	-1.0
5,562,463	+				+1.2
5,562,463	+				-1.5
5,562,463	+				+1.4
5,562,463	+				+1.5
5,562,463	+				+2.0
5,562,463	+				+1.7
5,562,463	+				-0.1
5,562,464	-				-0.5
5,562,464	-				+0.1
5,562,464	-				-0.3
5,562,464	-				-0.6
5,562,464	-				-0.6
5,562,464	-				-1.7
5,562,464	-				-0.2