Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17240

Experiment: p-Coumaric (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 2.5 mM
3,920,237	-		PFLU_RS17235	0.46	+0.3
3,920,248	+		PFLU_RS17235	0.46	-0.0
3,920,248	+		PFLU_RS17235	0.46	-0.4
3,920,249	-		PFLU_RS17235	0.46	-1.4
3,920,339	+		PFLU_RS17235	0.53	+0.4
3,920,340	-		PFLU_RS17235	0.54	-0.8
3,920,340	-		PFLU_RS17235	0.54	+0.3
3,920,351	+		PFLU_RS17235	0.54	-1.2
3,920,351	+		PFLU_RS17235	0.54	+1.4
3,920,351	+		PFLU_RS17235	0.54	+0.1
3,920,351	+		PFLU_RS17235	0.54	-1.0
3,920,478	-		PFLU_RS17235	0.64	-2.0
3,920,525	+		PFLU_RS17235	0.68	-1.0
3,920,525	+		PFLU_RS17235	0.68	-0.1
3,920,525	+		PFLU_RS17235	0.68	-1.6
3,920,525	+		PFLU_RS17235	0.68	-0.6
3,920,526	-		PFLU_RS17235	0.68	-0.5
3,920,526	-		PFLU_RS17235	0.68	-0.5
3,920,526	-		PFLU_RS17235	0.68	+0.0
3,920,526	-		PFLU_RS17235	0.68	+0.0
3,920,526	-		PFLU_RS17235	0.68	+0.6
3,920,526	-		PFLU_RS17235	0.68	+0.0
3,920,526	-		PFLU_RS17235	0.68	-1.2
3,920,526	-		PFLU_RS17235	0.68	+0.6
3,920,526	-		PFLU_RS17235	0.68	-1.0
3,920,571	+		PFLU_RS17235	0.72	-0.0
3,920,670	-		PFLU_RS17235	0.79	+0.1
3,920,670	-		PFLU_RS17235	0.79	+0.0
3,920,684	+		PFLU_RS17235	0.80	-1.0
3,920,684	+		PFLU_RS17235	0.80	+0.2
3,920,684	+		PFLU_RS17235	0.80	-2.0
3,920,685	-		PFLU_RS17235	0.80	+1.6
3,920,687	+		PFLU_RS17235	0.81	+0.1
3,920,687	+		PFLU_RS17235	0.81	+0.2
3,920,688	-		PFLU_RS17235	0.81	-1.2
3,920,688	-		PFLU_RS17235	0.81	+2.4
3,920,688	-		PFLU_RS17235	0.81	-1.0
3,920,688	-		PFLU_RS17235	0.81	-0.4
3,920,688	-		PFLU_RS17235	0.81	-2.1
3,920,905	+				+1.5
3,920,905	+				+0.9
3,920,905	+				-0.5
3,920,906	-				-1.5
3,920,906	-				-1.3
3,920,906	-				-1.4
3,920,906	-				-0.9
3,921,009	-				-1.6
3,921,031	-				+1.0
3,921,040	+				-0.6
3,921,041	-				+0.2
3,921,041	-				-1.3
3,921,109	-				-1.8
3,921,140	+				-0.1
3,921,140	+				-2.3
3,921,141	-				+1.8
3,921,141	-				+0.9
3,921,205	+				-0.8
3,921,205	+				-0.3
3,921,205	+				-0.6
3,921,205	+				+0.0
3,921,205	+				+0.7
3,921,205	+				+0.8
3,921,206	-				-0.3
3,921,206	-				-1.3
3,921,206	-				-1.0
3,921,206	-				+1.2
3,921,217	+				-1.4
3,921,217	+				-1.2
3,921,230	+				-0.6
3,921,230	+				+0.0
3,921,230	+				+1.0
3,921,230	+				-1.9
3,921,231	-				-0.1
3,921,231	-				-2.2
3,921,348	+		PFLU_RS17240	0.12	+1.1
3,921,348	+		PFLU_RS17240	0.12	-0.8
3,921,348	+		PFLU_RS17240	0.12	+0.6
3,921,348	+		PFLU_RS17240	0.12	-0.6
3,921,348	+		PFLU_RS17240	0.12	-2.7
3,921,349	-		PFLU_RS17240	0.12	-0.2
3,921,349	-		PFLU_RS17240	0.12	+0.0
3,921,349	-		PFLU_RS17240	0.12	-1.3
3,921,349	-		PFLU_RS17240	0.12	-1.1
3,921,349	-		PFLU_RS17240	0.12	+0.8
3,921,349	-		PFLU_RS17240	0.12	-0.5
3,921,349	-		PFLU_RS17240	0.12	+0.1
3,921,417	+		PFLU_RS17240	0.19	+0.4
3,921,449	+		PFLU_RS17240	0.22	-0.8
3,921,449	+		PFLU_RS17240	0.22	+0.5
3,921,449	+		PFLU_RS17240	0.22	-0.0
3,921,449	+		PFLU_RS17240	0.22	-0.2
3,921,449	+		PFLU_RS17240	0.22	+1.1
3,921,449	+		PFLU_RS17240	0.22	+1.2
3,921,450	-		PFLU_RS17240	0.22	-1.4
3,921,450	-		PFLU_RS17240	0.22	-0.6
3,921,523	+		PFLU_RS17240	0.29	-1.0
3,921,524	-		PFLU_RS17240	0.30	-1.9
3,921,542	+		PFLU_RS17240	0.31	+0.0
3,921,543	-		PFLU_RS17240	0.31	-0.6
3,921,543	-		PFLU_RS17240	0.31	-1.8
3,921,543	-		PFLU_RS17240	0.31	+0.9
3,921,543	-		PFLU_RS17240	0.31	+0.1
3,921,543	-		PFLU_RS17240	0.31	-0.8
3,921,543	-		PFLU_RS17240	0.31	-1.4
3,921,674	+		PFLU_RS17240	0.45	+0.2
3,921,674	+		PFLU_RS17240	0.45	-2.1
3,921,675	-		PFLU_RS17240	0.45	+0.4
3,921,733	+		PFLU_RS17240	0.50	-0.4
3,921,734	-		PFLU_RS17240	0.51	+0.9
3,921,855	+		PFLU_RS17240	0.63	+0.5
3,921,855	+		PFLU_RS17240	0.63	+0.3
3,921,927	+		PFLU_RS17240	0.70	-2.2
3,921,927	+		PFLU_RS17240	0.70	+0.6
3,921,941	+		PFLU_RS17240	0.71	+0.6
3,921,941	+		PFLU_RS17240	0.71	-0.1
3,921,942	-		PFLU_RS17240	0.71	+0.8
3,922,007	+		PFLU_RS17240	0.78	+0.3
3,922,007	+		PFLU_RS17240	0.78	+0.1
3,922,007	+		PFLU_RS17240	0.78	+0.8
3,922,007	+		PFLU_RS17240	0.78	+0.0
3,922,007	+		PFLU_RS17240	0.78	+1.7
3,922,007	+		PFLU_RS17240	0.78	+0.6
3,922,007	+		PFLU_RS17240	0.78	+0.9
3,922,007	+		PFLU_RS17240	0.78	-1.3
3,922,007	+		PFLU_RS17240	0.78	-0.2
3,922,007	+		PFLU_RS17240	0.78	-0.4
3,922,007	+		PFLU_RS17240	0.78	-2.7
3,922,007	+		PFLU_RS17240	0.78	+0.3
3,922,007	+		PFLU_RS17240	0.78	-0.2
3,922,008	-		PFLU_RS17240	0.78	-1.8
3,922,008	-		PFLU_RS17240	0.78	-0.1
3,922,008	-		PFLU_RS17240	0.78	+0.3
3,922,008	-		PFLU_RS17240	0.78	-0.9
3,922,008	-		PFLU_RS17240	0.78	-0.8
3,922,008	-		PFLU_RS17240	0.78	-0.2
3,922,008	-		PFLU_RS17240	0.78	-1.5
3,922,008	-		PFLU_RS17240	0.78	-1.4
3,922,076	+		PFLU_RS17240	0.85	+0.2
3,922,076	+		PFLU_RS17240	0.85	-2.2
3,922,079	+		PFLU_RS17240	0.85	+0.4
3,922,171	+				-0.1
3,922,227	+				+0.3
3,922,227	+				+0.4
3,922,227	+				+1.1
3,922,227	+				+0.5
3,922,227	+				+0.9
3,922,227	+				-0.2
3,922,228	-				+0.1
3,922,228	-				+0.9
3,922,228	-				-1.9
3,922,228	-				-1.1
3,922,228	-				+0.8
3,922,228	-				-0.6
3,922,228	-				+1.4
3,922,359	-				+0.1
3,922,359	-				+0.6
3,922,363	+				-1.1
3,922,363	+				+0.0
3,922,363	+				+0.3
3,922,364	-				-1.3
3,922,364	-				-0.4
3,922,364	-				+0.6
3,922,439	+				+0.4
3,922,439	+				+0.8
3,922,439	+				-0.0
3,922,439	+				-0.6
3,922,439	+				+2.0
3,922,439	+				+0.4
3,922,440	-				+0.7
3,922,440	-				+0.9
3,922,440	-				-0.0
3,922,443	+				+0.9
3,922,444	-				-0.4
3,922,444	-				-0.1
3,922,493	+				-0.4
3,922,493	+				-0.4
3,922,494	-				-0.8
3,922,494	-				-0.4
3,922,494	-				-0.3
3,922,494	-				-0.5
3,922,494	-				-0.4
3,922,683	+		PFLU_RS17245	0.12	-1.0
3,922,683	+		PFLU_RS17245	0.12	+0.6
3,922,683	+		PFLU_RS17245	0.12	+2.4
3,922,683	+		PFLU_RS17245	0.12	+0.1
3,922,684	-		PFLU_RS17245	0.12	+2.7
3,922,752	+		PFLU_RS17245	0.17	+1.3
3,922,752	+		PFLU_RS17245	0.17	-0.5
3,922,752	+		PFLU_RS17245	0.17	+0.6
3,922,752	+		PFLU_RS17245	0.17	+0.4
3,922,791	+		PFLU_RS17245	0.19	-0.2
3,922,791	+		PFLU_RS17245	0.19	+2.1
3,922,792	-		PFLU_RS17245	0.19	-0.8
3,922,998	+		PFLU_RS17245	0.33	-1.1
3,922,998	+		PFLU_RS17245	0.33	-0.2
3,922,998	+		PFLU_RS17245	0.33	-1.2
3,922,998	+		PFLU_RS17245	0.33	-0.7
3,922,999	-		PFLU_RS17245	0.33	-1.3
3,922,999	-		PFLU_RS17245	0.33	-0.2
3,922,999	-		PFLU_RS17245	0.33	+0.0
3,922,999	-		PFLU_RS17245	0.33	-0.1
3,923,212	-		PFLU_RS17245	0.47	-0.2