Experiment: Zinc 0.12 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3520 and Psest_3521 are separated by 273 nucleotides Psest_3521 and Psest_3522 are separated by 115 nucleotides Psest_3522 and Psest_3523 are separated by 113 nucleotides
Psest_3520: Psest_3520 - Short chain fatty acids transporter, at 3,699,143 to 3,700,483
_3520
Psest_3521: Psest_3521 - H+/gluconate symporter and related permeases, at 3,700,757 to 3,702,148
_3521
Psest_3522: Psest_3522 - 3-hydroxybutyrate dehydrogenase, at 3,702,264 to 3,703,034
_3522
Psest_3523: Psest_3523 - putative thymidine phosphorylase, at 3,703,148 to 3,704,728
_3523
Position (kb)
3700
3701
3702
3703 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3700.017 kb on - strand, within Psest_3520 at 3700.079 kb on + strand, within Psest_3520 at 3700.079 kb on + strand, within Psest_3520 at 3700.080 kb on - strand, within Psest_3520 at 3700.469 kb on + strand at 3700.469 kb on + strand at 3700.469 kb on + strand at 3700.469 kb on + strand at 3700.469 kb on + strand at 3700.470 kb on - strand at 3700.470 kb on - strand at 3700.485 kb on - strand at 3700.940 kb on + strand, within Psest_3521 at 3700.940 kb on + strand, within Psest_3521 at 3700.940 kb on + strand, within Psest_3521 at 3700.940 kb on + strand, within Psest_3521 at 3700.940 kb on + strand, within Psest_3521 at 3700.940 kb on + strand, within Psest_3521 at 3700.941 kb on - strand, within Psest_3521 at 3700.941 kb on - strand, within Psest_3521 at 3700.941 kb on - strand, within Psest_3521 at 3701.088 kb on - strand, within Psest_3521 at 3701.127 kb on - strand, within Psest_3521 at 3701.390 kb on + strand, within Psest_3521 at 3701.431 kb on + strand, within Psest_3521 at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.062 kb on + strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.063 kb on - strand at 3702.125 kb on + strand at 3702.125 kb on + strand at 3702.126 kb on - strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.128 kb on + strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.129 kb on - strand at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.718 kb on - strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.832 kb on + strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3702.833 kb on - strand, within Psest_3522 at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.114 kb on + strand at 3703.118 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.12 mM remove 3,700,017 - Psest_3520 0.65 +1.1 3,700,079 + Psest_3520 0.70 -0.4 3,700,079 + Psest_3520 0.70 +0.2 3,700,080 - Psest_3520 0.70 +1.8 3,700,469 + +0.4 3,700,469 + -1.7 3,700,469 + -0.2 3,700,469 + -0.3 3,700,469 + +0.3 3,700,470 - -0.8 3,700,470 - -1.2 3,700,485 - +0.6 3,700,940 + Psest_3521 0.13 -2.6 3,700,940 + Psest_3521 0.13 -1.2 3,700,940 + Psest_3521 0.13 -0.7 3,700,940 + Psest_3521 0.13 +0.8 3,700,940 + Psest_3521 0.13 -1.7 3,700,940 + Psest_3521 0.13 -1.5 3,700,941 - Psest_3521 0.13 -0.8 3,700,941 - Psest_3521 0.13 +0.1 3,700,941 - Psest_3521 0.13 -0.7 3,701,088 - Psest_3521 0.24 -0.1 3,701,127 - Psest_3521 0.27 +1.2 3,701,390 + Psest_3521 0.45 -1.2 3,701,431 + Psest_3521 0.48 -1.8 3,702,062 + -1.4 3,702,062 + -0.1 3,702,062 + -1.2 3,702,062 + +0.3 3,702,063 - -1.1 3,702,063 - -0.6 3,702,063 - -0.5 3,702,063 - -0.7 3,702,063 - -0.5 3,702,125 + +0.7 3,702,125 + +2.9 3,702,126 - +0.1 3,702,128 + -0.2 3,702,128 + -0.6 3,702,128 + +1.0 3,702,128 + +0.0 3,702,128 + +1.1 3,702,129 - -0.9 3,702,129 - -1.2 3,702,129 - +1.2 3,702,129 - -0.8 3,702,129 - +0.8 3,702,718 - Psest_3522 0.59 -0.1 3,702,718 - Psest_3522 0.59 -1.3 3,702,718 - Psest_3522 0.59 +1.1 3,702,832 + Psest_3522 0.74 -1.0 3,702,832 + Psest_3522 0.74 +0.5 3,702,832 + Psest_3522 0.74 +1.1 3,702,833 - Psest_3522 0.74 -2.1 3,702,833 - Psest_3522 0.74 +1.1 3,703,114 + -0.8 3,703,114 + -0.5 3,703,114 + -0.2 3,703,114 + -0.5 3,703,114 + +0.8 3,703,114 + +0.2 3,703,118 + -1.4
Or see this region's nucleotide sequence