Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30290

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
3,111,466	+		PFLU_RS13775	0.25	-0.2
3,111,466	+		PFLU_RS13775	0.25	-0.7
3,111,466	+		PFLU_RS13775	0.25	-2.7
3,111,467	-		PFLU_RS13775	0.25	+0.9
3,111,467	-		PFLU_RS13775	0.25	+0.4
3,111,578	+		PFLU_RS13775	0.43	-1.1
3,111,605	+		PFLU_RS13775	0.48	-2.3
3,111,606	-		PFLU_RS13775	0.48	-0.7
3,111,606	-		PFLU_RS13775	0.48	+0.7
3,111,632	+		PFLU_RS13775	0.52	+0.4
3,111,662	+		PFLU_RS13775	0.57	-0.8
3,111,723	-		PFLU_RS13775	0.67	-0.6
3,111,952	+				-1.7
3,111,953	-				+0.4
3,111,953	-				-0.8
3,111,953	-				-1.5
3,111,953	-				-0.9
3,112,015	+		PFLU_RS13780	0.22	-0.5
3,112,015	+		PFLU_RS13780	0.22	+2.1
3,112,016	-		PFLU_RS13780	0.22	-0.5
3,112,016	-		PFLU_RS13780	0.22	-1.1
3,112,085	+		PFLU_RS13780	0.38	-0.9
3,112,085	+		PFLU_RS13780	0.38	-1.5
3,112,085	+		PFLU_RS13780	0.38	+1.7
3,112,085	+		PFLU_RS13780	0.38	-0.7
3,112,085	+		PFLU_RS13780	0.38	-0.0
3,112,085	+		PFLU_RS13780	0.38	+0.8
3,112,085	+		PFLU_RS13780	0.38	+0.1
3,112,085	+		PFLU_RS13780	0.38	+1.3
3,112,086	-		PFLU_RS13780	0.38	-0.3
3,112,086	-		PFLU_RS13780	0.38	+2.8
3,112,086	-		PFLU_RS13780	0.38	+0.9
3,112,087	+		PFLU_RS13780	0.38	-0.5
3,112,087	+		PFLU_RS13780	0.38	+1.7
3,112,088	-		PFLU_RS13780	0.39	-0.4
3,112,088	-		PFLU_RS13780	0.39	+1.1
3,112,088	-		PFLU_RS13780	0.39	+0.2
3,112,088	-		PFLU_RS13780	0.39	-1.1
3,112,088	-		PFLU_RS13780	0.39	-0.9
3,112,234	+		PFLU_RS13780	0.72	-1.3
3,112,234	+		PFLU_RS13780	0.72	+0.1
3,112,234	+		PFLU_RS13780	0.72	-1.6
3,112,235	-		PFLU_RS13780	0.73	+0.2
3,112,235	-		PFLU_RS13780	0.73	-0.3
3,112,235	-		PFLU_RS13780	0.73	-1.2
3,112,267	+		PFLU_RS13780	0.80	+0.7
3,112,267	+		PFLU_RS13780	0.80	-0.9
3,112,268	-		PFLU_RS13780	0.80	+0.5
3,112,315	+				-0.2
3,112,316	-				-0.6
3,112,376	+				+0.1
3,112,376	+				+0.4
3,112,422	+				+1.1
3,112,422	+				-0.8
3,112,423	-				+0.7
3,112,423	-				+0.3
3,112,500	+		PFLU_RS30290	0.11	+1.7
3,112,501	-		PFLU_RS30290	0.11	-0.9
3,112,501	-		PFLU_RS30290	0.11	+1.7
3,112,556	+		PFLU_RS30290	0.19	-2.7
3,112,556	+		PFLU_RS30290	0.19	-1.5
3,112,557	-		PFLU_RS30290	0.19	-1.2
3,112,557	-		PFLU_RS30290	0.19	+0.3
3,112,560	+		PFLU_RS30290	0.19	+0.4
3,112,561	-		PFLU_RS30290	0.19	-1.2
3,112,602	+		PFLU_RS30290	0.24	-0.9
3,112,647	+		PFLU_RS30290	0.30	-0.2
3,112,686	-		PFLU_RS30290	0.35	-0.3
3,112,729	-		PFLU_RS30290	0.41	-2.4
3,112,811	+		PFLU_RS30290	0.51	-0.8
3,112,886	+		PFLU_RS30290	0.61	-0.8
3,112,888	+		PFLU_RS30290	0.61	-1.7
3,112,889	-		PFLU_RS30290	0.61	+2.7
3,112,912	+		PFLU_RS30290	0.64	+0.2
3,112,916	-		PFLU_RS30290	0.65	-0.9
3,113,075	+		PFLU_RS30290	0.85	-1.9
3,113,135	+				+0.1
3,113,153	+				-0.7
3,113,157	+				-0.8
3,113,157	+				-0.4
3,113,157	+				-1.0
3,113,157	+				-1.8
3,113,157	+				+1.9
3,113,157	+				-2.5
3,113,157	+				-1.2
3,113,157	+				+1.0
3,113,158	-				+1.7
3,113,178	+				-0.8
3,113,192	+				+2.7
3,113,192	+				+0.7
3,113,192	+				-0.3
3,113,192	+				-2.9
3,113,192	+				-2.6
3,113,192	+				-0.4
3,113,193	-				-1.3
3,113,193	-				+2.1
3,113,193	-				+0.1
3,113,193	-				+1.7
3,113,193	-				-1.7
3,113,196	+				+0.2
3,113,197	-				+1.5
3,113,204	+				-1.8
3,113,204	+				-1.3
3,113,204	+				+0.8
3,113,205	-				+0.7
3,113,205	-				-1.8
3,113,360	+				+0.2
3,113,360	+				-0.5
3,113,360	+				+0.2
3,113,361	-				-0.5
3,113,364	+				+2.2
3,113,364	+				-1.5
3,113,364	+				-0.9
3,113,364	+				-1.9
3,113,364	+				-0.3
3,113,364	+				-0.7
3,113,364	+				+1.7
3,113,364	+				+0.5
3,113,365	-				-0.3
3,113,365	-				-0.7
3,113,365	-				+2.4
3,113,365	-				-2.2
3,113,365	-				-0.9
3,113,365	-				+3.0
3,113,365	-				+1.3
3,113,365	-				-1.1
3,113,365	-				+0.7
3,113,365	-				-1.7
3,113,365	-				+0.5
3,113,365	-				+0.2
3,113,365	-				+0.7
3,113,365	-				-0.3
3,113,365	-				-0.8
3,113,437	+		PFLU_RS13790	0.10	+1.0
3,113,437	+		PFLU_RS13790	0.10	-0.3
3,113,437	+		PFLU_RS13790	0.10	-0.6
3,113,437	+		PFLU_RS13790	0.10	-0.3
3,113,437	+		PFLU_RS13790	0.10	-0.6
3,113,437	+		PFLU_RS13790	0.10	+0.5
3,113,437	+		PFLU_RS13790	0.10	+0.9
3,113,437	+		PFLU_RS13790	0.10	+1.5
3,113,437	+		PFLU_RS13790	0.10	+0.0
3,113,437	+		PFLU_RS13790	0.10	+0.8
3,113,437	+		PFLU_RS13790	0.10	+0.4
3,113,437	+		PFLU_RS13790	0.10	+0.2
3,113,438	-		PFLU_RS13790	0.11	-0.3
3,113,438	-		PFLU_RS13790	0.11	+0.1
3,113,438	-		PFLU_RS13790	0.11	-2.0
3,113,438	-		PFLU_RS13790	0.11	-0.1
3,113,438	-		PFLU_RS13790	0.11	+0.1
3,113,468	+		PFLU_RS13790	0.15	+0.2
3,113,469	-		PFLU_RS13790	0.15	-1.1
3,113,514	+		PFLU_RS13790	0.22	-1.6
3,113,515	-		PFLU_RS13790	0.23	+0.7
3,113,553	-		PFLU_RS13790	0.29	+1.7
3,113,740	+		PFLU_RS13790	0.58	-0.7
3,113,740	+		PFLU_RS13790	0.58	+1.3
3,113,740	+		PFLU_RS13790	0.58	+0.5
3,113,740	+		PFLU_RS13790	0.58	+0.9
3,113,740	+		PFLU_RS13790	0.58	+1.2
3,113,740	+		PFLU_RS13790	0.58	+0.7
3,113,740	+		PFLU_RS13790	0.58	-0.3
3,113,740	+		PFLU_RS13790	0.58	-0.9
3,113,740	+		PFLU_RS13790	0.58	-1.1
3,113,740	+		PFLU_RS13790	0.58	+1.2
3,113,741	-		PFLU_RS13790	0.58	+0.1
3,113,741	-		PFLU_RS13790	0.58	-0.2
3,113,741	-		PFLU_RS13790	0.58	+0.7
3,113,741	-		PFLU_RS13790	0.58	-0.9
3,113,741	-		PFLU_RS13790	0.58	+0.2
3,113,741	-		PFLU_RS13790	0.58	+1.0
3,113,741	-		PFLU_RS13790	0.58	+0.2
3,113,741	-		PFLU_RS13790	0.58	-0.1
3,113,741	-		PFLU_RS13790	0.58	-1.9
3,113,741	-		PFLU_RS13790	0.58	-0.3
3,113,741	-		PFLU_RS13790	0.58	-0.7
3,113,741	-		PFLU_RS13790	0.58	+1.7
3,113,800	+		PFLU_RS13790	0.67	+0.3
3,113,800	+		PFLU_RS13790	0.67	+0.5
3,113,800	+		PFLU_RS13790	0.67	-0.5
3,113,801	-		PFLU_RS13790	0.67	-1.3
3,113,813	+		PFLU_RS13790	0.69	+0.1
3,113,813	+		PFLU_RS13790	0.69	-1.5
3,113,813	+		PFLU_RS13790	0.69	-1.1
3,113,813	+		PFLU_RS13790	0.69	-0.3
3,113,813	+		PFLU_RS13790	0.69	+0.7
3,113,813	+		PFLU_RS13790	0.69	-2.6
3,113,814	-		PFLU_RS13790	0.69	-0.3
3,113,814	-		PFLU_RS13790	0.69	+0.3
3,113,814	-		PFLU_RS13790	0.69	-1.7
3,113,814	-		PFLU_RS13790	0.69	-1.3
3,113,814	-		PFLU_RS13790	0.69	-0.3
3,113,858	-		PFLU_RS13790	0.76	-2.2
3,113,858	-		PFLU_RS13790	0.76	-0.6
3,114,005	+				-0.3
3,114,006	-				-2.3
3,114,046	-				+0.7
3,114,056	+				+1.7
3,114,059	-				+0.2
3,114,059	-				-0.1
3,114,080	+				-0.3
3,114,179	+		PFLU_RS13795	0.27	-0.9