Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20045

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
4,535,233	-				+0.2
4,535,233	-				-2.4
4,535,272	+				+0.8
4,535,272	+				-0.5
4,535,421	+		PFLU_RS20040	0.28	-1.2
4,535,422	-		PFLU_RS20040	0.29	-1.5
4,535,422	-		PFLU_RS20040	0.29	+0.9
4,535,475	+		PFLU_RS20040	0.36	+0.8
4,535,475	+		PFLU_RS20040	0.36	+0.2
4,535,475	+		PFLU_RS20040	0.36	+0.1
4,535,476	-		PFLU_RS20040	0.37	+0.1
4,535,815	+		PFLU_RS20040	0.87	+1.7
4,535,816	-		PFLU_RS20040	0.87	-1.2
4,535,841	+				+4.4
4,535,842	-				+0.2
4,535,842	-				-0.7
4,535,842	-				+0.2
4,535,880	+				-0.7
4,535,880	+				+1.6
4,535,880	+				+0.5
4,535,880	+				-2.2
4,535,881	-				-1.3
4,535,881	-				+0.8
4,535,957	-				+0.4
4,535,996	+				+1.2
4,536,044	+				+0.8
4,536,045	-				+0.6
4,536,095	+				+0.0
4,536,095	+				-0.2
4,536,096	-				+0.6
4,536,096	-				-0.1
4,536,125	-				-1.2
4,536,198	+				-0.9
4,536,198	+				+0.1
4,536,198	+				+0.5
4,536,199	-				-0.8
4,536,199	-				+0.8
4,536,199	-				+0.1
4,536,246	+		PFLU_RS20045	0.15	-0.7
4,536,246	+		PFLU_RS20045	0.15	-0.2
4,536,247	-		PFLU_RS20045	0.15	+1.5
4,536,247	-		PFLU_RS20045	0.15	-0.2
4,536,247	-		PFLU_RS20045	0.15	+0.0
4,536,247	-		PFLU_RS20045	0.15	+0.8
4,536,276	+		PFLU_RS20045	0.22	-1.6
4,536,277	-		PFLU_RS20045	0.22	-0.6
4,536,653	-				+0.8
4,536,667	+				+0.4
4,536,667	+				-1.5
4,536,667	+				+0.4
4,536,667	+				-0.2
4,536,667	+				+1.4
4,536,667	+				-2.5
4,536,668	-				-0.1
4,536,668	-				+1.3
4,536,668	-				-1.2
4,536,668	-				-0.3
4,536,668	-				-0.4
4,536,688	+				+1.2
4,536,688	+				-0.4
4,536,688	+				+0.1
4,536,688	+				-0.2
4,536,688	+				+1.8
4,536,688	+				+0.8
4,536,688	+				+0.1
4,536,688	+				+0.7
4,536,688	+				+2.7
4,536,689	-				-0.8
4,536,689	-				-0.4
4,536,689	-				-0.9
4,536,699	-				-0.4
4,536,920	+		PFLU_RS20050	0.19	+2.0
4,536,920	+		PFLU_RS20050	0.19	+0.1
4,536,928	+		PFLU_RS20050	0.20	-0.9
4,536,928	+		PFLU_RS20050	0.20	-0.6
4,536,929	-		PFLU_RS20050	0.20	+2.1
4,536,929	-		PFLU_RS20050	0.20	-1.9
4,536,979	+		PFLU_RS20050	0.24	+0.1
4,536,981	+		PFLU_RS20050	0.24	+0.8
4,536,981	+		PFLU_RS20050	0.24	+2.2
4,536,981	+		PFLU_RS20050	0.24	-0.6
4,536,981	+		PFLU_RS20050	0.24	-1.1
4,536,981	+		PFLU_RS20050	0.24	-2.3
4,536,982	-		PFLU_RS20050	0.24	-0.2
4,536,982	-		PFLU_RS20050	0.24	+1.7
4,537,021	-		PFLU_RS20050	0.27	-0.3
4,537,141	+		PFLU_RS20050	0.36	+0.6
4,537,524	+		PFLU_RS20050	0.66	-0.1
4,537,524	+		PFLU_RS20050	0.66	-2.1
4,537,524	+		PFLU_RS20050	0.66	+0.2
4,537,524	+		PFLU_RS20050	0.66	+0.4
4,537,525	-		PFLU_RS20050	0.66	-0.7
4,537,525	-		PFLU_RS20050	0.66	-0.1
4,537,528	-		PFLU_RS20050	0.66	+2.7
4,537,537	-		PFLU_RS20050	0.67	+0.4
4,537,537	-		PFLU_RS20050	0.67	-0.8
4,537,537	-		PFLU_RS20050	0.67	-2.1