Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11565

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
2,563,541	+				+0.5
2,563,541	+				+0.7
2,563,542	-				-1.7
2,563,542	-				-1.0
2,563,730	+		PFLU_RS11560	0.39	-0.1
2,563,730	+		PFLU_RS11560	0.39	+0.7
2,563,730	+		PFLU_RS11560	0.39	-0.6
2,563,731	-		PFLU_RS11560	0.39	+1.5
2,563,731	-		PFLU_RS11560	0.39	-1.1
2,563,731	-		PFLU_RS11560	0.39	+3.8
2,563,823	-		PFLU_RS11560	0.53	+1.7
2,563,845	-		PFLU_RS11560	0.56	+0.2
2,564,006	+		PFLU_RS11560	0.81	-0.7
2,564,007	-		PFLU_RS11560	0.82	+1.7
2,564,007	-		PFLU_RS11560	0.82	+0.2
2,564,123	+				-0.8
2,564,123	+				-1.8
2,564,123	+				+1.5
2,564,124	-				-0.3
2,564,132	-				-1.6
2,564,205	+				-1.2
2,564,205	+				+0.4
2,564,275	-				-1.0
2,564,275	-				+0.8
2,564,295	-				-0.8
2,564,333	-				+0.2
2,564,524	+		PFLU_RS11565	0.20	-1.2
2,564,524	+		PFLU_RS11565	0.20	-0.3
2,564,525	-		PFLU_RS11565	0.21	-1.3
2,564,795	+		PFLU_RS11565	0.39	-1.0
2,564,795	+		PFLU_RS11565	0.39	-0.7
2,564,796	-		PFLU_RS11565	0.39	+0.2
2,564,796	-		PFLU_RS11565	0.39	-0.7
2,564,796	-		PFLU_RS11565	0.39	-0.2
2,564,838	-		PFLU_RS11565	0.42	-1.7
2,564,871	-		PFLU_RS11565	0.44	-0.8
2,565,449	-		PFLU_RS11565	0.84	+0.2
2,565,640	+				-1.8
2,565,658	+				-0.3
2,565,658	+				+0.1
2,565,658	+				+0.2
2,565,658	+				-0.8
2,565,659	-				-0.1
2,565,659	-				+1.6
2,565,659	-				+1.3
2,565,659	-				+0.2
2,565,700	+				-0.3
2,565,700	+				-1.0
2,565,700	+				-0.4
2,565,701	-				-0.3
2,565,701	-				-0.5
2,565,701	-				-0.3
2,565,701	-				+2.7
2,565,743	+				-0.1
2,565,744	-				-0.0
2,565,744	-				-2.1
2,565,800	+		PFLU_RS11570	0.13	-2.8
2,565,801	-		PFLU_RS11570	0.13	+1.7
2,565,801	-		PFLU_RS11570	0.13	+0.4
2,565,801	-		PFLU_RS11570	0.13	-0.6
2,565,801	-		PFLU_RS11570	0.13	-1.7
2,565,813	-		PFLU_RS11570	0.14	+0.4
2,565,818	+		PFLU_RS11570	0.15	-0.2
2,565,978	-		PFLU_RS11570	0.35	-0.3
2,566,064	+		PFLU_RS11570	0.46	-2.0
2,566,064	+		PFLU_RS11570	0.46	+0.6
2,566,064	+		PFLU_RS11570	0.46	-1.1
2,566,082	+		PFLU_RS11570	0.48	-0.0
2,566,238	+		PFLU_RS11570	0.68	+0.7
2,566,238	+		PFLU_RS11570	0.68	-0.2
2,566,238	+		PFLU_RS11570	0.68	-0.1
2,566,239	-		PFLU_RS11570	0.68	-0.8
2,566,361	+		PFLU_RS11570	0.84	-1.9
2,566,361	+		PFLU_RS11570	0.84	-0.8
2,566,361	+		PFLU_RS11570	0.84	-1.4
2,566,361	+		PFLU_RS11570	0.84	-1.4
2,566,362	-		PFLU_RS11570	0.84	-0.9
2,566,362	-		PFLU_RS11570	0.84	+1.1
2,566,362	-		PFLU_RS11570	0.84	+0.4
2,566,367	+		PFLU_RS11570	0.85	-0.4
2,566,368	-		PFLU_RS11570	0.85	-0.0
2,566,397	+		PFLU_RS11570	0.89	-0.0