Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4069
Experiment: Thallium(I) acetate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,239,540 | + | +0.2 | |||
4,239,540 | + | +1.4 | |||
4,239,540 | + | +1.1 | |||
4,239,540 | + | +1.3 | |||
4,239,541 | + | +2.3 | |||
4,239,541 | - | +1.0 | |||
4,239,541 | - | +0.4 | |||
4,239,541 | - | -2.2 | |||
4,239,541 | - | -0.6 | |||
4,239,542 | + | +2.6 | |||
4,239,542 | + | -1.3 | |||
4,240,185 | - | +1.2 | |||
4,240,185 | - | -0.4 | |||
4,240,185 | - | +2.0 | |||
4,240,187 | - | -0.3 | |||
4,240,523 | + | Psest_4070 | 0.12 | -0.6 | |
4,240,523 | + | Psest_4070 | 0.12 | +0.8 | |
4,240,523 | + | Psest_4070 | 0.12 | -1.3 | |
4,240,524 | - | Psest_4070 | 0.12 | -0.7 | |
4,240,524 | - | Psest_4070 | 0.12 | +0.6 | |
4,240,800 | - | Psest_4070 | 0.23 | +0.1 |
Or see this region's nucleotide sequence