Experiment: Thallium(I) acetate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2103 and Psest_2104 are separated by 126 nucleotides Psest_2104 and Psest_2105 are separated by 149 nucleotides Psest_2105 and Psest_2106 are separated by 2 nucleotides Psest_2106 and Psest_2107 are separated by 27 nucleotides
Psest_2103: Psest_2103 - Fatty acid cis/trans isomerase (CTI)., at 2,232,329 to 2,234,605
_2103
Psest_2104: Psest_2104 - IscR-regulated protein YhgI, at 2,234,732 to 2,235,316
_2104
Psest_2105: Psest_2105 - Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,235,466 to 2,236,449
_2105
Psest_2106: Psest_2106 - diguanylate cyclase (GGDEF) domain, at 2,236,452 to 2,237,408
_2106
Psest_2107: Psest_2107 - Topoisomerase IB, at 2,237,436 to 2,238,380
_2107
Position (kb)
2235
2236
2237 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2234.490 kb on + strand at 2234.519 kb on + strand at 2234.519 kb on + strand at 2234.520 kb on - strand at 2234.520 kb on - strand at 2234.540 kb on + strand at 2234.701 kb on - strand at 2234.701 kb on - strand at 2234.746 kb on + strand at 2234.747 kb on - strand at 2234.747 kb on - strand at 2234.825 kb on - strand, within Psest_2104 at 2235.077 kb on + strand, within Psest_2104 at 2235.077 kb on + strand, within Psest_2104 at 2235.077 kb on + strand, within Psest_2104 at 2235.077 kb on + strand, within Psest_2104 at 2235.077 kb on + strand, within Psest_2104 at 2235.078 kb on - strand, within Psest_2104 at 2235.081 kb on - strand, within Psest_2104 at 2235.081 kb on - strand, within Psest_2104 at 2235.289 kb on + strand at 2235.308 kb on + strand at 2235.308 kb on + strand at 2235.311 kb on + strand at 2235.311 kb on + strand at 2235.521 kb on + strand at 2235.522 kb on - strand at 2235.522 kb on - strand at 2235.738 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.840 kb on - strand, within Psest_2105 at 2235.874 kb on - strand, within Psest_2105 at 2235.874 kb on - strand, within Psest_2105 at 2236.047 kb on + strand, within Psest_2105 at 2236.047 kb on + strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.067 kb on - strand, within Psest_2105 at 2236.122 kb on - strand, within Psest_2105 at 2236.141 kb on - strand, within Psest_2105 at 2236.157 kb on - strand, within Psest_2105 at 2236.157 kb on - strand, within Psest_2105 at 2236.265 kb on + strand, within Psest_2105 at 2236.299 kb on - strand, within Psest_2105 at 2236.348 kb on + strand, within Psest_2105 at 2236.349 kb on - strand, within Psest_2105 at 2236.349 kb on - strand, within Psest_2105 at 2236.439 kb on + strand at 2236.623 kb on - strand, within Psest_2106 at 2236.743 kb on + strand, within Psest_2106 at 2236.744 kb on - strand, within Psest_2106 at 2236.776 kb on + strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.777 kb on - strand, within Psest_2106 at 2236.831 kb on + strand, within Psest_2106 at 2236.831 kb on + strand, within Psest_2106 at 2236.832 kb on - strand, within Psest_2106 at 2236.832 kb on - strand, within Psest_2106 at 2236.845 kb on + strand, within Psest_2106 at 2236.846 kb on - strand, within Psest_2106 at 2236.861 kb on + strand, within Psest_2106 at 2236.941 kb on + strand, within Psest_2106 at 2236.942 kb on - strand, within Psest_2106 at 2236.942 kb on - strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.061 kb on + strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.062 kb on - strand, within Psest_2106 at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.358 kb on + strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand at 2237.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.1 mg/ml remove 2,234,490 + -0.3 2,234,519 + +1.5 2,234,519 + -1.2 2,234,520 - +1.3 2,234,520 - +0.2 2,234,540 + +0.7 2,234,701 - -0.3 2,234,701 - -1.0 2,234,746 + -0.2 2,234,747 - +2.1 2,234,747 - +0.1 2,234,825 - Psest_2104 0.16 +0.6 2,235,077 + Psest_2104 0.59 -0.2 2,235,077 + Psest_2104 0.59 +1.1 2,235,077 + Psest_2104 0.59 +1.1 2,235,077 + Psest_2104 0.59 +2.1 2,235,077 + Psest_2104 0.59 +2.1 2,235,078 - Psest_2104 0.59 +0.1 2,235,081 - Psest_2104 0.60 +1.6 2,235,081 - Psest_2104 0.60 -0.2 2,235,289 + -0.3 2,235,308 + -3.6 2,235,308 + -0.2 2,235,311 + -1.3 2,235,311 + -0.4 2,235,521 + -0.9 2,235,522 - +1.5 2,235,522 - -1.2 2,235,738 - Psest_2105 0.28 -1.2 2,235,840 - Psest_2105 0.38 -0.4 2,235,840 - Psest_2105 0.38 +0.5 2,235,840 - Psest_2105 0.38 -1.9 2,235,840 - Psest_2105 0.38 -1.4 2,235,874 - Psest_2105 0.41 +1.6 2,235,874 - Psest_2105 0.41 +0.8 2,236,047 + Psest_2105 0.59 +0.1 2,236,047 + Psest_2105 0.59 -0.3 2,236,067 - Psest_2105 0.61 +0.1 2,236,067 - Psest_2105 0.61 -0.9 2,236,067 - Psest_2105 0.61 +2.1 2,236,067 - Psest_2105 0.61 -2.3 2,236,122 - Psest_2105 0.67 +0.6 2,236,141 - Psest_2105 0.69 +0.8 2,236,157 - Psest_2105 0.70 -0.7 2,236,157 - Psest_2105 0.70 -0.1 2,236,265 + Psest_2105 0.81 +0.2 2,236,299 - Psest_2105 0.85 +2.1 2,236,348 + Psest_2105 0.90 +0.3 2,236,349 - Psest_2105 0.90 +0.4 2,236,349 - Psest_2105 0.90 -2.3 2,236,439 + +0.6 2,236,623 - Psest_2106 0.18 +0.4 2,236,743 + Psest_2106 0.30 -0.2 2,236,744 - Psest_2106 0.31 -0.4 2,236,776 + Psest_2106 0.34 +0.4 2,236,777 - Psest_2106 0.34 -0.9 2,236,777 - Psest_2106 0.34 +1.9 2,236,777 - Psest_2106 0.34 +0.9 2,236,777 - Psest_2106 0.34 -0.7 2,236,831 + Psest_2106 0.40 -0.3 2,236,831 + Psest_2106 0.40 -3.1 2,236,832 - Psest_2106 0.40 +1.2 2,236,832 - Psest_2106 0.40 +1.0 2,236,845 + Psest_2106 0.41 -0.5 2,236,846 - Psest_2106 0.41 +0.1 2,236,861 + Psest_2106 0.43 +1.2 2,236,941 + Psest_2106 0.51 +0.3 2,236,942 - Psest_2106 0.51 +0.8 2,236,942 - Psest_2106 0.51 +0.3 2,237,061 + Psest_2106 0.64 +0.2 2,237,061 + Psest_2106 0.64 +0.1 2,237,061 + Psest_2106 0.64 +1.0 2,237,061 + Psest_2106 0.64 +0.1 2,237,061 + Psest_2106 0.64 -0.4 2,237,061 + Psest_2106 0.64 +0.6 2,237,062 - Psest_2106 0.64 +0.0 2,237,062 - Psest_2106 0.64 -0.9 2,237,062 - Psest_2106 0.64 -1.2 2,237,062 - Psest_2106 0.64 +0.1 2,237,062 - Psest_2106 0.64 -0.4 2,237,062 - Psest_2106 0.64 -1.0 2,237,062 - Psest_2106 0.64 +1.0 2,237,062 - Psest_2106 0.64 -1.8 2,237,062 - Psest_2106 0.64 +0.0 2,237,358 + -1.1 2,237,358 + +0.7 2,237,358 + -1.7 2,237,358 + -1.1 2,237,359 - +1.1 2,237,359 - +0.8 2,237,359 - -1.1 2,237,359 - -0.2 2,237,359 - -0.9 2,237,359 - -0.6 2,237,359 - +0.2 2,237,359 - +1.1
Or see this region's nucleotide sequence