Experiment: Thallium(I) acetate 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1353 and Psest_1354 are separated by 16 nucleotides Psest_1354 and Psest_1355 are separated by 119 nucleotides Psest_1355 and Psest_1356 are separated by 1 nucleotides Psest_1356 and Psest_1357 are separated by 114 nucleotides
Psest_1353: Psest_1353 - Uncharacterized protein conserved in bacteria, at 1,465,067 to 1,465,486
_1353
Psest_1354: Psest_1354 - Uncharacterized protein conserved in bacteria, at 1,465,503 to 1,465,922
_1354
Psest_1355: Psest_1355 - Predicted protease of the Abi (CAAX) family, at 1,466,042 to 1,466,791
_1355
Psest_1356: Psest_1356 - Predicted periplasmic protein, at 1,466,793 to 1,467,347
_1356
Psest_1357: Psest_1357 - Uncharacterized protein conserved in bacteria, at 1,467,462 to 1,468,154
_1357
Position (kb)
1466
1467 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1465.288 kb on + strand, within Psest_1353 at 1465.350 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.426 kb on + strand, within Psest_1353 at 1465.427 kb on - strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.428 kb on + strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.429 kb on - strand, within Psest_1353 at 1465.435 kb on + strand, within Psest_1353 at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.470 kb on + strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.471 kb on - strand at 1465.806 kb on + strand, within Psest_1354 at 1465.807 kb on - strand, within Psest_1354 at 1465.956 kb on - strand at 1465.966 kb on - strand at 1466.041 kb on - strand at 1466.055 kb on + strand at 1466.905 kb on + strand, within Psest_1356 at 1466.905 kb on + strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.906 kb on - strand, within Psest_1356 at 1466.968 kb on + strand, within Psest_1356 at 1467.024 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.028 kb on + strand, within Psest_1356 at 1467.029 kb on - strand, within Psest_1356 at 1467.029 kb on - strand, within Psest_1356 at 1467.029 kb on - strand, within Psest_1356 at 1467.029 kb on - strand, within Psest_1356 at 1467.205 kb on + strand, within Psest_1356 at 1467.206 kb on - strand, within Psest_1356 at 1467.279 kb on + strand, within Psest_1356 at 1467.279 kb on + strand, within Psest_1356 at 1467.279 kb on + strand, within Psest_1356 at 1467.280 kb on - strand, within Psest_1356 at 1467.457 kb on - strand at 1467.482 kb on - strand at 1467.607 kb on + strand, within Psest_1357 at 1467.713 kb on - strand, within Psest_1357
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.1 mg/ml remove 1,465,288 + Psest_1353 0.53 +1.2 1,465,350 + Psest_1353 0.67 -0.9 1,465,426 + Psest_1353 0.85 -0.3 1,465,426 + Psest_1353 0.85 -1.5 1,465,426 + Psest_1353 0.85 -1.1 1,465,426 + Psest_1353 0.85 +2.8 1,465,426 + Psest_1353 0.85 -0.5 1,465,426 + Psest_1353 0.85 +1.1 1,465,427 - Psest_1353 0.86 -0.4 1,465,428 + Psest_1353 0.86 -0.8 1,465,428 + Psest_1353 0.86 -2.6 1,465,428 + Psest_1353 0.86 -2.6 1,465,429 - Psest_1353 0.86 -1.4 1,465,429 - Psest_1353 0.86 -0.8 1,465,429 - Psest_1353 0.86 +0.8 1,465,429 - Psest_1353 0.86 -0.0 1,465,435 + Psest_1353 0.88 +0.3 1,465,470 + -1.1 1,465,470 + +0.0 1,465,470 + -1.2 1,465,470 + -0.6 1,465,470 + +0.2 1,465,470 + -0.0 1,465,470 + -0.7 1,465,471 - -2.3 1,465,471 - +0.3 1,465,471 - +0.2 1,465,806 + Psest_1354 0.72 -2.0 1,465,807 - Psest_1354 0.72 -0.3 1,465,956 - -2.2 1,465,966 - -1.5 1,466,041 - +0.3 1,466,055 + -0.4 1,466,905 + Psest_1356 0.20 -0.5 1,466,905 + Psest_1356 0.20 +0.8 1,466,906 - Psest_1356 0.20 -0.6 1,466,906 - Psest_1356 0.20 +0.8 1,466,906 - Psest_1356 0.20 +0.4 1,466,906 - Psest_1356 0.20 -1.2 1,466,968 + Psest_1356 0.32 +2.6 1,467,024 + Psest_1356 0.42 -0.7 1,467,028 + Psest_1356 0.42 -0.5 1,467,028 + Psest_1356 0.42 -0.3 1,467,028 + Psest_1356 0.42 +0.4 1,467,028 + Psest_1356 0.42 -0.4 1,467,028 + Psest_1356 0.42 +0.2 1,467,028 + Psest_1356 0.42 +0.2 1,467,029 - Psest_1356 0.43 +0.6 1,467,029 - Psest_1356 0.43 +0.3 1,467,029 - Psest_1356 0.43 +0.8 1,467,029 - Psest_1356 0.43 +1.0 1,467,205 + Psest_1356 0.74 -0.3 1,467,206 - Psest_1356 0.74 -1.6 1,467,279 + Psest_1356 0.88 -0.4 1,467,279 + Psest_1356 0.88 -1.3 1,467,279 + Psest_1356 0.88 +1.1 1,467,280 - Psest_1356 0.88 +1.3 1,467,457 - -2.0 1,467,482 - -1.8 1,467,607 + Psest_1357 0.21 +1.2 1,467,713 - Psest_1357 0.36 -1.1
Or see this region's nucleotide sequence